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Peptidase_domain_containing_protein
Euk-VirPandoravirus_salinus
Peptidase_domain_containing_protein__YP_009430014__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_009430014 ↗
- Protein ID:
- Peptidase_domain_containing_protein
- Kingdom:
- euk
Quality
66.7
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 375-449
D2
medium
residues 98-138_226-374
Domain cluster:
rep: uncharacterized_peptidase_C1-like_protein__YP_003986985__Acanthamoeba_polyphaga_mimivirus__212035__D36-61_173-280
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5fpwA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.64 | 61.0 | 5.13e-01 | 99.5% | 86.3% |
| 1xkgA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.62 | 59.0 | 5.00e-01 | 100.0% | 80.2% |
| 3oisB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.62 | 59.0 | 5.18e-01 | 99.5% | 95.9% |
| 5egwA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.61 | 57.0 | 4.54e-01 | 100.0% | 68.9% |
| 4k7cA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.58 | 45.0 | 3.48e-01 | 79.5% | 92.1% |
| 1deuB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.57 | 54.0 | 4.79e-01 | 99.5% | 97.7% |
| 3pw3D00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 43.0 | 3.48e-01 | 80.0% | 94.3% |
| 8aimG01 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.53 | 20.0 | 2.94e-01 | 74.7% | 76.5% |
| 1sp4B00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.52 | 49.0 | 4.77e-01 | 99.5% | 91.2% |
| 6y43A01 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.51 | 34.0 | 3.84e-01 | 92.6% | 86.4% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3331216 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.72 | 44.0 | 4.95e-01 | 78.4% | 76.7% |
| 3670468 | 4.1.1.332 ↗ | beta barrels › SH3 › SH3 › SH3 › Peptidase_C1 | 0.71 | 37.0 | 4.53e-01 | 77.9% | 75.4% |
| 3995290 | 4.1.1.332 ↗ | beta barrels › SH3 › SH3 › SH3 › Peptidase_C1 | 0.70 | 41.0 | 5.36e-01 | 71.1% | 100.0% |
| 3998812 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.66 | 64.0 | 5.09e-01 | 100.0% | 80.9% |
| 3244679 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.66 | 60.0 | 4.69e-01 | 95.3% | 84.7% |
| 3479869 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.66 | 64.0 | 5.15e-01 | 100.0% | 86.4% |
| 3620332 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.66 | 60.0 | 4.71e-01 | 94.2% | 82.8% |
| 3938586 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.65 | 62.0 | 5.48e-01 | 99.5% | 97.3% |
| 4377695 | 219.1.1.2 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1,Propeptide_C1 | 0.65 | 62.0 | 5.07e-01 | 98.4% | 87.3% |
| 3242975 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.65 | 62.0 | 4.97e-01 | 100.0% | 81.5% |
| 3519107 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.65 | 62.0 | 4.98e-01 | 100.0% | 86.4% |
| 3250297 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.65 | 61.0 | 5.23e-01 | 97.9% | 92.5% |
| 3656345 | 219.1.1.2 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1,Propeptide_C1 | 0.65 | 62.0 | 4.92e-01 | 98.9% | 82.6% |
| 3395889 | 219.1.1.2 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1,Propeptide_C1 | 0.64 | 62.0 | 5.02e-01 | 99.5% | 88.1% |
| 4960361 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.64 | 61.0 | 5.25e-01 | 100.0% | 98.2% |
| 3489030 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.64 | 61.0 | 5.03e-01 | 98.9% | 87.7% |
| 3940207 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.64 | 60.0 | 5.46e-01 | 98.4% | 100.0% |
| 3261680 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.64 | 61.0 | 5.15e-01 | 99.5% | 85.8% |
| 3521904 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 31.0 | 4.40e-01 | 80.0% | 94.7% |
| 5033092 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.63 | 60.0 | 5.17e-01 | 100.0% | 86.4% |
| 5032667 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.63 | 60.0 | 4.90e-01 | 100.0% | 85.3% |
| 2793930 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.62 | 60.0 | 4.95e-01 | 100.0% | 85.7% |
| 5034502 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.62 | 51.0 | 4.81e-01 | 85.3% | 100.0% |
| 3497089 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.62 | 58.0 | 4.88e-01 | 99.5% | 86.9% |
| 3486878 | 219.1.1.110 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1, Peptidase_C1_2 | 0.61 | 58.0 | 4.81e-01 | 99.5% | 84.4% |
| 3940173 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.61 | 58.0 | 5.32e-01 | 98.4% | 100.0% |
| 5056229 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.61 | 49.0 | 4.47e-01 | 82.6% | 97.5% |
| 3421122 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.61 | 58.0 | 5.21e-01 | 99.5% | 100.0% |
| 3431172 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.61 | 53.0 | 4.80e-01 | 90.0% | 99.2% |
| 4268173 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.61 | 57.0 | 4.53e-01 | 100.0% | 68.5% |
| 3993778 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.61 | 57.0 | 5.19e-01 | 98.4% | 86.5% |
| 3906939 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.61 | 58.0 | 4.82e-01 | 100.0% | 84.3% |
| 3216614 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.61 | 58.0 | 4.71e-01 | 100.0% | 83.1% |
| 3668220 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.60 | 57.0 | 4.79e-01 | 98.4% | 82.0% |
| 3481577 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.60 | 55.0 | 4.99e-01 | 94.7% | 100.0% |
| 3891882 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.60 | 57.0 | 4.87e-01 | 99.5% | 94.4% |
| 3617140 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.60 | 55.0 | 4.60e-01 | 96.8% | 78.1% |
| 3434623 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.60 | 48.0 | 4.65e-01 | 82.6% | 99.0% |
| None | — | 0.59 | 56.0 | 4.53e-01 | 100.0% | 76.5% | |
| 3807595 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.59 | 55.0 | 4.46e-01 | 98.4% | 71.8% |
| 3299435 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.59 | 54.0 | 4.53e-01 | 97.9% | 78.4% |
| 3676121 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.58 | 45.0 | 4.35e-01 | 80.0% | 100.0% |
| 3437797 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.57 | 50.0 | 4.53e-01 | 91.1% | 89.6% |
| 3803751 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.57 | 45.0 | 4.34e-01 | 81.6% | 99.5% |
| 3970000 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 30.0 | 3.94e-01 | 97.9% | 96.0% |
| 4929262 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.52 | 31.0 | 3.45e-01 | 94.2% | 71.6% |
| 3374893 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.52 | 29.0 | 3.31e-01 | 81.6% | 71.0% |
| 3319851 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.52 | 46.0 | 4.47e-01 | 95.8% | 84.3% |
| 3823515 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.52 | 31.0 | 3.47e-01 | 87.4% | 73.5% |
| 3495032 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.51 | 48.0 | 4.64e-01 | 99.5% | 87.0% |
| 3444353 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.51 | 47.0 | 4.34e-01 | 96.8% | 87.2% |
| 3433434 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.51 | 48.0 | 4.60e-01 | 100.0% | 88.8% |
D3
medium
residues 139-225