←Back to structures
Peptidase_incomplete_domain_containing_protein
Euk-VirPandoravirus_neocaledonia
Peptidase_incomplete_domain_containing_protein__YP_009482197__Pandoravirus_neocaledonia__2107708
Identity
- Accession:
- YP_009482197 ↗
- Protein ID:
- Peptidase_incomplete_domain_containing_protein
- Kingdom:
- euk
Quality
77.2
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-187_266-364
Domain cluster:
rep: papain_cysteine_peptidase__YP_009506973__Tunisvirus_fontaine2__1421067__D22-54_72-229_317-392
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5egwA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.65 | 49.0 | 4.45e-01 | 75.5% | 77.1% |
| 1jqpA02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 41.0 | 4.67e-01 | 75.9% | 100.0% |
| 3gkuA03 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.54 | 16.0 | 3.18e-01 | 80.1% | 100.0% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3479869 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.65 | 52.0 | 5.01e-01 | 82.5% | 89.8% |
| 5080542 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.60 | 45.0 | 4.72e-01 | 76.2% | 98.1% |
| 3516722 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.59 | 51.0 | 3.88e-01 | 88.8% | 45.3% |
| 3998812 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.58 | 53.0 | 4.97e-01 | 94.1% | 87.1% |
| 4960361 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.55 | 49.0 | 4.97e-01 | 92.0% | 100.0% |
| 3505458 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.55 | 48.0 | 5.05e-01 | 91.6% | 100.0% |
| 3514380 | 219.1.1.110 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1, Peptidase_C1_2 | 0.54 | 46.0 | 4.56e-01 | 89.5% | 100.0% |
D2
medium
residues 188-265