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Phosphohydrolase

Euk-Vir

Pandoravirus_quercus

Phosphohydrolase__YP_009482748__Pandoravirus_quercus__2107709

Identity

Accession:
YP_009482748 ↗
Protein ID:
Phosphohydrolase
Kingdom:
euk

Quality

83.9 mean pLDDT

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 124-142_239-359
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3u1nB01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.94 90.0 6.58e-01 100.0% 61.3%
2hekA01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.84 80.0 6.19e-01 100.0% 59.8%
2honB01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.84 80.0 6.27e-01 100.0% 66.7%
2q14B01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.78 75.0 6.11e-01 100.0% 64.4%
4i8oA03 1.10.8.1130 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Bacterial toxin RNase RnlA/LsoA, C-terminal Dmd-binding domain 0.54 23.0 3.12e-01 98.6% 77.6%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3641475 131.1.1.5 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD,HD_assoc_2 0.96 93.0 6.17e-01 100.0% 41.8%
4526572 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.96 93.0 6.05e-01 100.0% 43.6%
3707996 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.95 92.0 6.04e-01 100.0% 42.7%
1118688 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.95 92.0 6.02e-01 100.0% 41.8%
3305107 131.1.1.5 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD,HD_assoc_2 0.95 92.0 6.15e-01 100.0% 42.7%
1108429 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.95 92.0 6.02e-01 100.0% 42.0%
3930766 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.95 92.0 6.06e-01 100.0% 45.6%
3810621 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.94 91.0 6.12e-01 100.0% 42.7%
3499256 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.94 91.0 5.85e-01 100.0% 39.8%
3234287 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.93 90.0 5.86e-01 100.0% 44.9%
3596396 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.93 90.0 5.81e-01 100.0% 41.9%
4024140 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.93 90.0 5.97e-01 100.0% 44.8%
3713574 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.91 88.0 5.89e-01 100.0% 41.4%
5074639 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.88 65.0 4.93e-01 75.7% 36.9%
4987370 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.87 84.0 5.57e-01 100.0% 42.6%
5037474 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.87 83.0 5.68e-01 100.0% 41.7%
4995570 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.86 81.0 5.54e-01 100.0% 41.4%
5065594 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.85 82.0 5.53e-01 100.0% 44.5%
5013151 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.85 82.0 5.62e-01 100.0% 43.0%
4976465 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.85 81.0 5.57e-01 100.0% 40.9%
4928970 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.85 81.0 5.57e-01 100.0% 44.7%
5070183 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.85 81.0 5.62e-01 100.0% 43.3%
4785 131.1.1.5 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD,HD_assoc_2 0.84 80.0 5.71e-01 100.0% 45.5%
5024096 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.84 80.0 5.53e-01 100.0% 42.8%
5083274 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.84 80.0 5.52e-01 100.0% 49.0%
5026206 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.84 80.0 5.72e-01 100.0% 45.8%
373351 131.1.1.5 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD,HD_assoc_2 0.84 80.0 5.40e-01 100.0% 40.0%
4956580 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.83 79.0 5.64e-01 100.0% 44.9%
5047046 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.82 78.0 5.32e-01 100.0% 43.3%
4970001 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.82 78.0 5.43e-01 100.0% 39.8%
321905 131.1.1.5 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD,HD_assoc_2 0.82 78.0 5.40e-01 100.0% 40.6%
4951714 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.81 77.0 5.42e-01 100.0% 41.8%
4940288 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.81 77.0 5.42e-01 100.0% 41.8%
4932938 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.81 77.0 5.37e-01 100.0% 41.5%
4971620 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.80 75.0 5.31e-01 100.0% 45.5%
4378587 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.70 65.0 4.86e-01 100.0% 46.8%
D2 medium residues 151-205
PDB
Domain cluster: rep: Phosphohydrolase__YP_009480716__Pandoravirus_macleodensis__2107707__D121-178
D3 medium residues 360-440
PDB
Domain cluster: rep: Phosphohydrolase__YP_008318586__Pandoravirus_dulcis__1349409__D389-460
D4 medium residues 441-485_527-577
PDB
Domain cluster: rep: Phosphohydrolase__YP_009481642__Pandoravirus_neocaledonia__2107708__D414-457_497-544