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PrGVORF30
Euk-VirArtogeia_rapae_granulovirus
PrGVORF30__YP_003429354__Artogeia_rapae_granulovirus__362830
Identity
- Accession:
- YP_003429354 ↗
- Protein ID:
- PrGVORF30
- Kingdom:
- euk
Quality
83.1
mean pLDDT
Taxonomy
TaxID: 362830
Cluster
View cluster (43 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 135-189
Domain cluster:
rep: pif-3_protein__YP_007250522__Thysanoplusia_orichalcea_nucleopolyhedrovirus__101850__D151-200
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05006.18 best | PIF3 | 58.6 | 1.10e-15 | 90.9% | 32.9% |
D2
medium
residues 51-115
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05006.18 best | PIF3 | 48.5 | 1.50e-12 | 100.0% | 46.3% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5cbeE00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 34.0 | 3.44e-01 | 80.0% | 62.5% |
| 4dzrA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 45.0 | 3.44e-01 | 100.0% | 98.2% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4651987 | 205.1.1.0 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin | 0.55 | 38.0 | 3.09e-01 | 73.8% | 51.9% |
| 3583595 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.54 | 36.0 | 3.75e-01 | 95.4% | 76.7% |
| 3531322 | 101.1.2.564 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27514 | 0.54 | 34.0 | 3.50e-01 | 93.8% | 66.2% |
| 3444811 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.53 | 36.0 | 3.89e-01 | 93.8% | 92.0% |
| 3469940 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.53 | 42.0 | 2.95e-01 | 95.4% | 78.5% |
| 5004287 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 32.0 | 3.35e-01 | 70.8% | 66.7% |
| 4937616 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 31.0 | 3.20e-01 | 93.8% | 65.0% |