←Back to structures
PrGVORF97
Euk-VirArtogeia_rapae_granulovirus
PrGVORF97__YP_003429421__Artogeia_rapae_granulovirus__362830
Identity
- Accession:
- YP_003429421 ↗
- Protein ID:
- PrGVORF97
- Kingdom:
- euk
Quality
90.3
mean pLDDT
Taxonomy
TaxID: 362830
Cluster
View cluster (12 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-96
D2
high
residues 107-169
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2atfA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 37.0 | 2.79e-01 | 100.0% | 23.7% |
| 3d31A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 39.0 | 2.68e-01 | 74.6% | 70.6% |
| 5v7qZ00 | 3.30.1390.20 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L30/L7 | 0.52 | 42.0 | 4.34e-01 | 100.0% | 96.6% |
| 6spbZ00 | 3.30.1390.20 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L30/L7 | 0.52 | 42.0 | 4.38e-01 | 100.0% | 100.0% |
| 1vw4U00 | 3.30.1390.20 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L30/L7 | 0.52 | 42.0 | 3.87e-01 | 100.0% | 69.5% |
| 2py5A03 | 3.30.1770.10 | Alpha Beta › 2-Layer Sandwich › TPR 1 domain of DNA polymerase › TPR 1 domain of DNA polymerase | 0.51 | 40.0 | 3.59e-01 | 100.0% | 60.4% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4990098 | 887.1.1.1 ↗ | a+b two layers › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal_L30 | 0.51 | 44.0 | 3.47e-01 | 100.0% | 93.1% |
| 3366708 | 844.1.1.6 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › GRDP_C | 0.51 | 41.0 | 2.92e-01 | 100.0% | 89.0% |
| 3740598 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 38.0 | 2.92e-01 | 100.0% | 33.5% |