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Protein_kinase
Euk-VirParamecium_bursaria_Chlorella_virus_1
Protein_kinase__NP_048970__Paramecium_bursaria_Chlorella_virus_1__10506
Identity
- Accession:
- NP_048970 ↗
- Protein ID:
- Protein_kinase
- Kingdom:
- euk
Quality
69.6
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Chlorovirus›
Paramecium_bursaria_Chlorella_virus_1
TaxID: 10506
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 35-182
Domain cluster:
rep: Protein_kinase__NP_048632__Paramecium_bursaria_Chlorella_virus_1__10506__D33-181
D2
medium
residues 183-253
Domain cluster:
rep: ORF14L__YP_009447841__Ictalurid_herpesvirus_2__508441__D203-288
Pfam (4)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00069.32 best | Pkinase | 35.6 | 9.90e-09 | 95.8% | 18.3% |
| PF03109.23 | ABC1 | 23.5 | 4.00e-05 | 95.8% | 15.5% |
| PF07714.24 | PK_Tyr_Ser-Thr | 23.7 | 3.80e-05 | 93.0% | 19.0% |
| PF01636.30 | APH | 24.4 | 3.10e-05 | 73.2% | 14.2% |
D3
medium
residues 254-337
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.58 | 35.0 | 3.91e-01 | 72.6% | 80.6% |
| 5xdcB01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.50 | 38.0 | 3.51e-01 | 94.0% | 62.2% |
| 2v6zM00 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.50 | 28.0 | 2.96e-01 | 86.9% | 58.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3309832 | 109.4.1.1262 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long | 0.59 | 35.0 | 2.76e-01 | 72.6% | 27.4% |
| 3805059 | 109.4.1.1277 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, TPR_24 | 0.57 | 33.0 | 3.05e-01 | 72.6% | 42.7% |
| 3443555 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.51 | 36.0 | 2.67e-01 | 73.8% | 47.8% |
| 3738757 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.51 | 36.0 | 2.28e-01 | 91.7% | 11.9% |
D4
medium
residues 500-575