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QC4_scaffold_20_prodigal-single.1__X__X__00008
Bact-VirQC4_scaffold_20_prodigal-single.1__X__X__00008
Identity
- Kingdom:
- phage
Quality
75.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-64
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xa6A02 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.68 | 46.0 | 4.49e-01 | 71.0% | 69.6% |
| 2w0tA00 | 3.30.60.160 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.62 | 40.0 | 4.69e-01 | 79.0% | 97.7% |
| 2rowA01 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.61 | 43.0 | 4.19e-01 | 77.4% | 98.6% |
| 2konA00 | 3.30.160.350 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 38.0 | 3.51e-01 | 75.8% | 87.8% |
| 5eo4A01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 36.0 | 2.80e-01 | 71.0% | 66.9% |
| 1s5uE00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 35.0 | 2.77e-01 | 72.6% | 89.0% |
| 1zkpC00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.50 | 41.0 | 2.84e-01 | 96.8% | 86.5% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3625637 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.70 | 48.0 | 5.22e-01 | 71.0% | 94.0% |
| 3845514 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.69 | 47.0 | 4.80e-01 | 71.0% | 76.7% |
| 3232866 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.66 | 45.0 | 4.50e-01 | 72.6% | 70.8% |
| 3575444 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.63 | 41.0 | 4.47e-01 | 71.0% | 84.0% |
| 3472836 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.62 | 42.0 | 4.11e-01 | 72.6% | 72.9% |
| 3657469 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.58 | 40.0 | 3.50e-01 | 74.2% | 61.0% |
| 4285739 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.54 | 39.0 | 3.73e-01 | 77.4% | 90.4% |
| 5073441 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.53 | 42.0 | 3.54e-01 | 88.7% | 68.2% |
| 5007119 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 36.0 | 3.03e-01 | 72.6% | 44.8% |
| 5071678 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 41.0 | 3.40e-01 | 98.4% | 95.4% |
| 3177004 | 109.4.1.3140 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Dsl1_N, Dsl1_C | 0.51 | 38.0 | 2.22e-01 | 82.3% | 24.9% |