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QC4_scaffold_20_prodigal-single.1__X__X__00073
Bact-VirQC4_scaffold_20_prodigal-single.1__X__X__00073
Identity
- Kingdom:
- phage
Quality
74.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-81
Domain cluster:
representative
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pe0A03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.82 | 53.0 | 5.71e-01 | 100.0% | 78.1% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 49.0 | 5.56e-01 | 100.0% | 85.7% |
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 47.0 | 5.12e-01 | 100.0% | 74.6% |
| 2eczA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.77 | 55.0 | 5.75e-01 | 100.0% | 81.4% |
| 1gcqB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.76 | 53.0 | 6.01e-01 | 100.0% | 96.5% |
| 2ekhA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.76 | 53.0 | 5.23e-01 | 100.0% | 68.8% |
| 3nmzD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.76 | 53.0 | 5.11e-01 | 100.0% | 65.5% |
| 1ov3A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.75 | 52.0 | 5.99e-01 | 100.0% | 100.0% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.75 | 54.0 | 5.98e-01 | 100.0% | 95.0% |
| 4fssB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.75 | 54.0 | 5.98e-01 | 100.0% | 95.1% |
| 2egcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.75 | 54.0 | 5.47e-01 | 100.0% | 77.3% |
| 2rqtA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 54.0 | 5.97e-01 | 100.0% | 95.1% |
| 3i35A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 53.0 | 5.98e-01 | 100.0% | 100.0% |
| 2fpeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.73 | 52.0 | 5.71e-01 | 100.0% | 91.9% |
| 6vlfA03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.73 | 52.0 | 5.81e-01 | 100.0% | 98.3% |
| 1yn8A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.73 | 52.0 | 5.82e-01 | 100.0% | 96.6% |
| 2pqhB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.73 | 50.0 | 5.40e-01 | 100.0% | 84.6% |
| 6uzjA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 52.0 | 5.59e-01 | 100.0% | 90.5% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 50.0 | 5.30e-01 | 100.0% | 80.9% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 53.0 | 5.62e-01 | 100.0% | 88.1% |
| 5o99A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 50.0 | 5.49e-01 | 100.0% | 91.7% |
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 53.0 | 5.67e-01 | 100.0% | 92.4% |
| 1wfwA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 53.0 | 5.41e-01 | 100.0% | 82.4% |
| 1zuyA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 50.0 | 5.60e-01 | 100.0% | 100.0% |
| 2krsA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 51.0 | 5.66e-01 | 97.4% | 100.0% |
| 2ke9A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 52.0 | 5.55e-01 | 100.0% | 92.5% |
| 6bioA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 48.0 | 5.45e-01 | 94.7% | 100.0% |
| 4krtB03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 55.0 | 5.86e-01 | 100.0% | 100.0% |
| 2evrA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 53.0 | 5.41e-01 | 100.0% | 87.8% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 49.0 | 5.11e-01 | 100.0% | 89.7% |
| 2eyzA03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 41.0 | 3.92e-01 | 89.5% | 54.9% |
| 3npfA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 48.0 | 4.98e-01 | 100.0% | 88.6% |
| 5yprA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 53.0 | 5.14e-01 | 100.0% | 81.9% |
| 4wsiA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 49.0 | 5.18e-01 | 93.4% | 95.5% |
| 3upuA03 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 55.0 | 4.58e-01 | 98.7% | 93.9% |
| 3iwzA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 43.0 | 3.63e-01 | 75.0% | 73.9% |
| 2pqqA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 42.0 | 3.40e-01 | 100.0% | 40.1% |
| 3gydA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 41.0 | 3.23e-01 | 77.6% | 56.2% |
| 1hw5A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 41.0 | 3.53e-01 | 77.6% | 73.6% |
| 3fx3B01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 41.0 | 3.42e-01 | 100.0% | 43.4% |
| 4ev0D01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 39.0 | 3.28e-01 | 76.3% | 67.9% |
| 1ft9A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 39.0 | 3.34e-01 | 80.3% | 64.9% |
| 2fmyA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 38.0 | 3.20e-01 | 78.9% | 62.5% |
| 3dg6A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.50 | 42.0 | 3.73e-01 | 96.1% | 100.0% |
| 2wzpR01 | 2.30.300.20 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Phage tail base-plate attachment protein, domain D1/D2 | 0.50 | 41.0 | 3.17e-01 | 96.1% | 91.8% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3625911 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.78 | 56.0 | 5.99e-01 | 100.0% | 87.7% |
| 3259033 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.77 | 54.0 | 5.94e-01 | 100.0% | 91.7% |
| 3621642 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.77 | 54.0 | 5.36e-01 | 100.0% | 70.0% |
| 3921563 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.76 | 54.0 | 5.39e-01 | 100.0% | 71.2% |
| 3539147 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.76 | 53.0 | 5.51e-01 | 100.0% | 78.6% |
| 3918340 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.76 | 55.0 | 5.72e-01 | 100.0% | 82.9% |
| 3234274 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.75 | 54.0 | 5.62e-01 | 100.0% | 81.4% |
| 3248342 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.75 | 52.0 | 5.61e-01 | 100.0% | 84.6% |
| 3480351 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 54.0 | 5.47e-01 | 100.0% | 78.7% |
| 3396896 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 53.0 | 5.41e-01 | 97.4% | 78.7% |
| 4038705 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.71 | 56.0 | 5.95e-01 | 100.0% | 96.9% |
| 4602101 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.71 | 54.0 | 5.79e-01 | 100.0% | 93.8% |
| 4127826 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.71 | 54.0 | 5.81e-01 | 98.7% | 95.4% |
| 3978088 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 52.0 | 5.54e-01 | 100.0% | 92.3% |
| 1673571 | 4.1.1.120 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_16 | 0.70 | 53.0 | 5.38e-01 | 100.0% | 80.3% |
| 3587555 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 53.0 | 5.50e-01 | 100.0% | 87.1% |
| 4196229 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.70 | 54.0 | 5.57e-01 | 100.0% | 88.6% |
| 3254502 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.69 | 53.0 | 4.94e-01 | 100.0% | 65.3% |
| 3840076 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.69 | 52.0 | 5.72e-01 | 97.4% | 100.0% |
| 2410170 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.69 | 51.0 | 5.55e-01 | 98.7% | 95.2% |
| 3786196 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 54.0 | 3.85e-01 | 100.0% | 29.1% |
| 3881116 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.69 | 54.0 | 4.83e-01 | 84.2% | 95.2% |
| 4091533 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.68 | 54.0 | 5.64e-01 | 100.0% | 92.9% |
| 4650162 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 51.0 | 5.49e-01 | 100.0% | 93.8% |
| 4358722 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.67 | 51.0 | 4.62e-01 | 98.7% | 59.0% |
| 5063004 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 50.0 | 5.38e-01 | 100.0% | 93.8% |
| 4207556 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.65 | 53.0 | 5.52e-01 | 100.0% | 97.1% |
| 1263580 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.64 | 48.0 | 4.87e-01 | 100.0% | 82.7% |
| 4291404 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 51.0 | 5.19e-01 | 100.0% | 89.3% |
| 4386715 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.62 | 57.0 | 5.46e-01 | 100.0% | 88.2% |
| 3427504 | 4.1.1.150 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3123 | 0.61 | 49.0 | 5.15e-01 | 100.0% | 94.3% |
| 3594578 | 4.18.1.0 ↗ | beta barrels › SH3 › Plus3 › Plus3 | 0.61 | 43.0 | 3.74e-01 | 100.0% | 47.5% |
| 3271958 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.61 | 44.0 | 3.65e-01 | 100.0% | 43.0% |
| 4991671 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.61 | 37.0 | 4.53e-01 | 98.7% | 96.0% |
| 4594253 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.60 | 47.0 | 4.86e-01 | 94.7% | 91.4% |
| 4399923 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.59 | 43.0 | 3.78e-01 | 100.0% | 52.7% |
| 1109334 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.59 | 43.0 | 3.55e-01 | 77.6% | 68.8% |
| 4878426 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.59 | 42.0 | 3.68e-01 | 100.0% | 50.0% |
| 4228340 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.58 | 41.0 | 3.35e-01 | 100.0% | 38.6% |
| 4100916 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.58 | 42.0 | 3.43e-01 | 77.6% | 80.0% |
| 3498585 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.58 | 51.0 | 4.39e-01 | 97.4% | 90.8% |
| 3892172 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.58 | 52.0 | 4.48e-01 | 100.0% | 97.5% |
| 3282383 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.58 | 42.0 | 3.49e-01 | 76.3% | 69.3% |
| 3397638 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.58 | 51.0 | 4.35e-01 | 98.7% | 92.0% |
| 3870132 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.58 | 52.0 | 4.93e-01 | 100.0% | 96.7% |
| 3497158 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.57 | 42.0 | 3.17e-01 | 100.0% | 31.9% |
| 3894023 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 49.0 | 4.74e-01 | 96.1% | 95.3% |
| 3795559 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.56 | 49.0 | 4.45e-01 | 98.7% | 95.2% |
| 3968567 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.56 | 40.0 | 3.37e-01 | 77.6% | 67.1% |
| 3481190 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 48.0 | 4.14e-01 | 100.0% | 92.5% |
| 3281783 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.53 | 39.0 | 3.09e-01 | 100.0% | 35.3% |
| 2162081 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.53 | 38.0 | 3.16e-01 | 75.0% | 65.5% |
| 4536848 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.52 | 44.0 | 3.78e-01 | 97.4% | 92.3% |
| 4455326 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.52 | 43.0 | 4.12e-01 | 100.0% | 80.0% |
| 4111349 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.52 | 43.0 | 4.02e-01 | 100.0% | 74.7% |
D2
high
residues 85-250
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.75 | 24.0 | 3.82e-01 | 76.5% | 70.4% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.74 | 31.0 | 4.94e-01 | 75.9% | 100.0% |
| 2b4vA03 | 3.30.70.1970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 32.0 | 4.13e-01 | 84.9% | 73.7% |
| 4fppB01 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.68 | 28.0 | 4.31e-01 | 84.9% | 91.5% |
| 2aymA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.68 | 32.0 | 4.34e-01 | 90.4% | 86.7% |
| 4nooB00 | 1.10.8.1160 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.68 | 35.0 | 4.67e-01 | 95.8% | 89.5% |
| 6bq9A02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.66 | 34.0 | 4.34e-01 | 91.6% | 86.2% |
| 3d2wA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.65 | 29.0 | 4.08e-01 | 81.9% | 90.3% |
| 2yb5F01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.65 | 23.0 | 3.09e-01 | 81.3% | 57.0% |
| 1owxA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.64 | 30.0 | 3.58e-01 | 82.5% | 63.7% |
| 1i6zA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.63 | 34.0 | 3.79e-01 | 74.1% | 64.4% |
| 1sr2A00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.63 | 23.0 | 2.77e-01 | 81.3% | 45.7% |
| 3kdgA02 | 3.30.1370.100 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › MutL, C-terminal domain, regulatory subdomain | 0.63 | 28.0 | 3.59e-01 | 81.9% | 71.3% |
| 3owaB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.62 | 40.0 | 4.10e-01 | 95.2% | 66.2% |
| 3qo8A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.61 | 38.0 | 4.71e-01 | 81.9% | 98.1% |
| 2nzcB00 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.60 | 28.0 | 3.84e-01 | 94.6% | 88.9% |
| 2p7vA00 | 1.20.120.1370 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Regulator of RNA polymerase sigma(70) subunit, domain 4 | 0.59 | 41.0 | 4.35e-01 | 100.0% | 78.8% |
| 3nymA00 | 6.10.290.10 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.59 | 41.0 | 4.68e-01 | 90.4% | 96.8% |
| 2j0nB00 | 1.20.1710.10 | Mainly Alpha › Up-down Bundle › IpaD-like › IpaD-like | 0.59 | 45.0 | 4.30e-01 | 78.9% | 99.5% |
| 3tulB00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.57 | 41.0 | 4.57e-01 | 94.6% | 94.0% |
| 1kaeA03 | 1.20.5.1300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.56 | 18.0 | 3.15e-01 | 73.5% | 87.3% |
| 4m70B00 | 1.10.246.200 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain | 0.56 | 32.0 | 4.11e-01 | 97.0% | 100.0% |
| 1vw4F02 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.56 | 26.0 | 3.43e-01 | 90.4% | 79.3% |
| 4udqA02 | 3.30.410.40 | Alpha Beta › 2-Layer Sandwich › Cholesterol Oxidase; domain 2 › | 0.55 | 32.0 | 3.13e-01 | 83.7% | 51.1% |
| 3fkeA01 | 1.10.8.950 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Filoviridae VP35, C-terminal inhibitory domain, helical subdomain | 0.54 | 21.0 | 3.15e-01 | 84.3% | 83.1% |
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.51 | 32.0 | 3.93e-01 | 93.4% | 96.3% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 36.0 | 3.81e-01 | 78.3% | 81.0% |
| 1el6A03 | 3.90.1160.10 | Alpha Beta › Alpha-Beta Complex › Baseplate Structural Protein Gp11; Chain: A, domain 3 › Baseplate structural protein gp11, finger domain | 0.51 | 30.0 | 3.60e-01 | 84.3% | 88.1% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3594206 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.71 | 32.0 | 4.49e-01 | 89.2% | 88.6% |
| 3503444 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.70 | 38.0 | 5.19e-01 | 94.6% | 100.0% |
| 3619435 | 192.8.1.36 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › M_domain | 0.70 | 39.0 | 5.09e-01 | 86.1% | 95.8% |
| 4019922 | 611.4.1.0 ↗ | alpha bundles › N-cbl like › PG0775 C-terminal domain-like › PG0775 C-terminal domain-like | 0.67 | 45.0 | 4.45e-01 | 97.0% | 64.6% |
| 3215082 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.66 | 39.0 | 4.37e-01 | 75.3% | 73.3% |
| 3788278 | 3883.1.1.1 ↗ | alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf | 0.64 | 44.0 | 4.07e-01 | 100.0% | 54.8% |
| 4957621 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.64 | 42.0 | 4.53e-01 | 86.1% | 76.6% |
| 4102298 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.62 | 26.0 | 3.62e-01 | 80.1% | 80.0% |
| 3424523 | 604.5.1.7 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › ALMT | 0.62 | 30.0 | 3.89e-01 | 80.7% | 80.0% |
| 3589614 | 601.1.2.99 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › DAGK_prokar | 0.62 | 38.0 | 4.33e-01 | 95.8% | 81.3% |
| 4984355 | 3843.1.1.1 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › Oxidored_q2 | 0.61 | 32.0 | 4.10e-01 | 89.8% | 84.8% |
| 3718659 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.61 | 38.0 | 2.58e-01 | 93.4% | 16.5% |
| 5011084 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.59 | 26.0 | 3.55e-01 | 77.1% | 81.2% |
| 3573621 | 5059.1.1.8 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › Mg_trans_NIPA | 0.58 | 33.0 | 3.38e-01 | 81.9% | 56.2% |
| 3898413 | 5093.1.1.8 ↗ | a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Prominin | 0.52 | 37.0 | 3.30e-01 | 72.9% | 93.2% |
| 3953644 | 150.8.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE › PPE | 0.51 | 47.0 | 4.65e-01 | 100.0% | 96.1% |
| 223985 | 3600.1.1.1 ↗ | alpha bundles › uncharacterized protein SYNW0670 › uncharacterized protein SYNW0670 › uncharacterized protein SYNW0670 › YlqD | 0.51 | 36.0 | 3.82e-01 | 78.3% | 81.5% |