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QC4_scaffold_20_prodigal-single.1__X__X__00075
Bact-VirQC4_scaffold_20_prodigal-single.1__X__X__00075
Identity
- Kingdom:
- phage
Quality
78.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-51
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gnlB02 | 1.10.287.1890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.82 | 73.0 | 6.51e-01 | 100.0% | 88.2% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.81 | 67.0 | 5.63e-01 | 91.8% | 61.7% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 71.0 | 5.77e-01 | 100.0% | 82.6% |
| 3i2fA02 | 1.10.3020.10 | Mainly Alpha › Orthogonal Bundle › alpha-amino acid ester hydrolase ( Helical cap domain) › alpha-amino acid ester hydrolase ( Helical cap domain) | 0.80 | 65.0 | 5.15e-01 | 87.8% | 47.4% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.79 | 65.0 | 5.61e-01 | 91.8% | 60.3% |
| 1ykhA00 | 6.10.140.200 | Special › Helix non-globular › Helix Hairpins › | 0.76 | 60.0 | 4.93e-01 | 91.8% | 56.8% |
| 3craA02 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.74 | 63.0 | 4.72e-01 | 100.0% | 45.3% |
| 1yc9A01 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.73 | 58.0 | 3.59e-01 | 93.9% | 22.9% |
| 1lvfB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 63.0 | 4.99e-01 | 100.0% | 77.9% |
| 3tufA00 | 1.10.287.4300 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Stage III sporulation protein AH-like | 0.73 | 58.0 | 4.55e-01 | 93.9% | 59.1% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 58.0 | 4.00e-01 | 93.9% | 30.1% |
| 2qgaB01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.72 | 57.0 | 4.39e-01 | 89.8% | 41.2% |
| 2gscC00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.71 | 60.0 | 4.73e-01 | 100.0% | 90.0% |
| 2efkA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.70 | 54.0 | 3.48e-01 | 91.8% | 19.1% |
| 2oznB01 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.70 | 55.0 | 4.74e-01 | 89.8% | 66.3% |
| 5u56A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.69 | 57.0 | 4.54e-01 | 100.0% | 59.8% |
| 3nbxX03 | 1.20.58.1510 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 56.0 | 4.61e-01 | 100.0% | 70.3% |
| 3upuA03 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 54.0 | 4.07e-01 | 100.0% | 35.1% |
| 4mk3A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.66 | 54.0 | 4.28e-01 | 100.0% | 59.1% |
| 5aj3N01 | 1.10.287.1480 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.65 | 48.0 | 3.99e-01 | 89.8% | 44.0% |
| 2guzB00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.64 | 55.0 | 5.06e-01 | 100.0% | 93.8% |
| 2jaeA03 | 1.20.1440.240 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.64 | 51.0 | 4.18e-01 | 93.9% | 57.4% |
| 3fmcC01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.64 | 52.0 | 3.29e-01 | 98.0% | 69.7% |
| 3behB01 | 1.20.120.540 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels | 0.63 | 51.0 | 4.05e-01 | 100.0% | 65.8% |
| 2qyuA02 | 1.25.40.300 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Putative secreted effector protein | 0.62 | 47.0 | 3.27e-01 | 100.0% | 22.6% |
| 2v6eA01 | 1.10.287.3180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 50.0 | 4.38e-01 | 93.9% | 60.0% |
| 3uarA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.61 | 49.0 | 3.98e-01 | 98.0% | 57.9% |
| 3n5lA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 47.0 | 4.56e-01 | 93.9% | 75.4% |
| 4hojA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 45.0 | 3.75e-01 | 98.0% | 51.5% |
| 1rqgA02 | 2.170.220.10 | Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › | 0.51 | 39.0 | 2.93e-01 | 93.9% | 70.1% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3905660 | 603.1.1.164 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SERTA | 0.91 | 79.0 | 7.08e-01 | 93.9% | 78.5% |
| 3762595 | 604.7.1.13 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › HR1 | 0.88 | 74.0 | 5.96e-01 | 91.8% | 55.6% |
| 4945538 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.88 | 74.0 | 6.51e-01 | 91.8% | 71.4% |
| 3697264 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.88 | 75.0 | 4.81e-01 | 93.9% | 24.4% |
| 4000262 | 192.5.1.1 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 | 0.88 | 75.0 | 6.04e-01 | 93.9% | 55.6% |
| 4378877 | 3711.1.1.20 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › DUF444 | 0.87 | 72.0 | 6.16e-01 | 89.8% | 64.0% |
| 3790121 | 603.1.1.114 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › HR1 | 0.87 | 74.0 | 5.78e-01 | 93.9% | 50.0% |
| 4569741 | 3712.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Med11 | 0.86 | 72.0 | 5.44e-01 | 93.9% | 44.3% |
| 3408508 | 3712.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Med11 | 0.86 | 72.0 | 6.10e-01 | 93.9% | 63.7% |
| 3942662 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.85 | 72.0 | 5.73e-01 | 93.9% | 52.6% |
| 5014600 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.85 | 77.0 | 5.60e-01 | 100.0% | 44.8% |
| 4096596 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.84 | 70.0 | 4.00e-01 | 91.8% | 10.9% |
| 4132296 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.84 | 69.0 | 6.49e-01 | 91.8% | 83.3% |
| 3507884 | 109.4.1.506 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nop14 | 0.84 | 74.0 | 4.36e-01 | 100.0% | 15.3% |
| 3608012 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.83 | 69.0 | 5.70e-01 | 91.8% | 80.0% |
| 4940281 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.83 | 70.0 | 6.36e-01 | 93.9% | 80.0% |
| 3607086 | 4992.1.1.0 ↗ | extended segments › RelB-like › RelB-like › RelB-like | 0.82 | 67.0 | 5.75e-01 | 91.8% | 66.3% |
| 4453591 | 3602.1.1.4 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › RRP36 | 0.82 | 69.0 | 4.98e-01 | 93.9% | 41.5% |
| 3189247 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.82 | 70.0 | 4.40e-01 | 93.9% | 29.5% |
| 4034201 | 192.7.1.1 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › FemAB | 0.81 | 67.0 | 6.27e-01 | 91.8% | 86.7% |
| 3205582 | 605.8.1.2 ↗ | alpha duplicates or obligate multimers › ROP-like › BAS1536-like › BAS1536-like › PF27894 | 0.80 | 71.0 | 6.43e-01 | 98.0% | 75.4% |
| 3477880 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.80 | 66.0 | 4.06e-01 | 93.9% | 17.2% |
| 3600361 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.80 | 64.0 | 5.23e-01 | 91.8% | 55.8% |
| 5017781 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.80 | 70.0 | 4.57e-01 | 100.0% | 26.7% |
| 5050107 | 159.1.1.1 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG | 0.79 | 69.0 | 5.56e-01 | 100.0% | 61.1% |
| 3213281 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.78 | 64.0 | 3.98e-01 | 93.9% | 20.4% |
| 3576467 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.78 | 63.0 | 3.90e-01 | 93.9% | 26.9% |
| 2507423 | 632.2.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › FIVAR | 0.77 | 67.0 | 5.75e-01 | 98.0% | 79.5% |
| 3563618 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.76 | 66.0 | 5.12e-01 | 100.0% | 67.3% |
| 4091718 | 2004.1.1.442 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21 | 0.76 | 61.0 | 3.63e-01 | 91.8% | 13.2% |
| 3719637 | 192.12.1.0 ↗ | alpha bundles › Long alpha-hairpin › Transcriptional repressor TraM › Transcriptional repressor TraM | 0.75 | 62.0 | 5.10e-01 | 93.9% | 56.7% |
| 3271303 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.74 | 61.0 | 3.85e-01 | 93.9% | 37.0% |
| 5056432 | 607.1.1.0 ↗ | alpha arrays › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain › Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain | 0.74 | 64.0 | 4.80e-01 | 100.0% | 77.6% |
| 3888162 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.73 | 60.0 | 4.56e-01 | 93.9% | 60.0% |
| 3255232 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.71 | 56.0 | 3.61e-01 | 91.8% | 20.0% |
| 4156290 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.71 | 54.0 | 5.62e-01 | 85.7% | 100.0% |
| 3592341 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.67 | 53.0 | 3.50e-01 | 95.9% | 46.7% |
| 3729123 | 5059.1.1.40 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › SLC35F, DUF3955 | 0.65 | 52.0 | 3.24e-01 | 95.9% | 37.2% |
| 4953126 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.63 | 47.0 | 3.16e-01 | 89.8% | 19.2% |
D2
high
residues 60-144
Domain cluster:
rep: MN270266.1__QGJ85858.1__X__00053__D136-224
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13280.13 best | WYL | 30.7 | 3.40e-07 | 74.1% | 94.3% |
CATH (52)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.79 | 54.0 | 6.31e-01 | 75.3% | 100.0% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.75 | 56.0 | 6.26e-01 | 78.8% | 100.0% |
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 56.0 | 5.84e-01 | 80.0% | 90.9% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 47.0 | 5.11e-01 | 81.2% | 82.6% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 46.0 | 5.45e-01 | 72.9% | 100.0% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 45.0 | 5.27e-01 | 76.5% | 100.0% |
| 2jngA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 55.0 | 5.77e-01 | 87.1% | 100.0% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 46.0 | 5.04e-01 | 76.5% | 85.3% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 44.0 | 4.82e-01 | 74.1% | 83.3% |
| 2e6zA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 42.0 | 4.90e-01 | 70.6% | 89.8% |
| 2e70A00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 44.0 | 4.77e-01 | 72.9% | 78.9% |
| 1m1gB03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 44.0 | 4.91e-01 | 72.9% | 88.9% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 47.0 | 5.24e-01 | 78.8% | 100.0% |
| 1x6gA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 47.0 | 4.84e-01 | 72.9% | 80.2% |
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 43.0 | 4.79e-01 | 76.5% | 87.3% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 45.0 | 5.05e-01 | 91.8% | 93.8% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 45.0 | 4.79e-01 | 71.8% | 92.1% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 43.0 | 4.92e-01 | 77.6% | 96.6% |
| 1ts9A00 | 2.30.30.210 | Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 | 0.66 | 46.0 | 4.46e-01 | 81.2% | 64.3% |
| 3k8uA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.65 | 57.0 | 4.96e-01 | 98.8% | 91.6% |
| 2ky9A01 | 2.30.30.1130 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 44.0 | 4.86e-01 | 70.6% | 89.6% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 50.0 | 5.35e-01 | 98.8% | 100.0% |
| 4mi7A00 | 3.90.70.170 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.63 | 55.0 | 4.89e-01 | 98.8% | 92.7% |
| 1n27A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 47.0 | 4.55e-01 | 80.0% | 93.8% |
| 1h3zA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 49.0 | 4.54e-01 | 84.7% | 92.6% |
| 1khcA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 43.0 | 4.75e-01 | 75.3% | 93.8% |
| 2k4yA00 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.61 | 51.0 | 5.12e-01 | 91.8% | 94.2% |
| 1wjsA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 44.0 | 3.92e-01 | 77.6% | 70.9% |
| 8t5tA01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.60 | 43.0 | 3.38e-01 | 76.5% | 87.0% |
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.59 | 52.0 | 4.54e-01 | 100.0% | 95.4% |
| 2x5cA01 | 3.30.70.3590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 44.0 | 4.33e-01 | 80.0% | 82.4% |
| 2gs5A01 | 3.40.1740.10 | Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like | 0.59 | 47.0 | 3.68e-01 | 87.1% | 85.6% |
| 2vobB02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.59 | 52.0 | 3.90e-01 | 100.0% | 63.1% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 42.0 | 4.09e-01 | 77.6% | 83.3% |
| 3ia8A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 42.0 | 3.40e-01 | 76.5% | 93.8% |
| 2hqvA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.58 | 45.0 | 3.68e-01 | 87.1% | 76.2% |
| 3itwA02 | 3.30.720.110 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.57 | 32.0 | 3.82e-01 | 76.5% | 83.9% |
| 2q7eA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.56 | 42.0 | 3.15e-01 | 78.8% | 86.3% |
| 2w7qB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.56 | 39.0 | 3.12e-01 | 72.9% | 81.7% |
| 3kyfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 44.0 | 4.05e-01 | 85.9% | 97.4% |
| 2rqrA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 44.0 | 3.97e-01 | 85.9% | 89.9% |
| 1iwlA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.55 | 40.0 | 3.22e-01 | 77.6% | 85.9% |
| 2hhzA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 39.0 | 3.37e-01 | 75.3% | 84.1% |
| 2l1tA00 | 2.30.110.70 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.54 | 39.0 | 3.61e-01 | 75.3% | 59.6% |
| 1vjvA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.54 | 46.0 | 3.27e-01 | 100.0% | 95.7% |
| 2hq7B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 36.0 | 3.11e-01 | 71.8% | 85.9% |
| 2hq9B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 37.0 | 3.26e-01 | 76.5% | 94.9% |
| 2a2jA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 36.0 | 2.82e-01 | 74.1% | 74.4% |
| 1wv4B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 35.0 | 2.98e-01 | 71.8% | 72.1% |
| 1wczA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 40.0 | 3.69e-01 | 87.1% | 79.1% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.51 | 40.0 | 4.05e-01 | 84.7% | 100.0% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 33.0 | 3.63e-01 | 70.6% | 88.9% |
ECOD (92)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5077969 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.89 | 69.0 | 7.18e-01 | 81.2% | 87.5% |
| 3281271 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.88 | 70.0 | 6.91e-01 | 83.5% | 82.2% |
| 3279470 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.88 | 68.0 | 6.66e-01 | 80.0% | 75.6% |
| 3286662 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.87 | 69.0 | 6.48e-01 | 82.4% | 72.0% |
| 3387119 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.87 | 67.0 | 6.57e-01 | 82.4% | 75.6% |
| 3290160 | 4.1.1.323 ↗ | beta barrels › SH3 › SH3 › SH3 › WYL | 0.86 | 72.0 | 7.40e-01 | 87.1% | 100.0% |
| 4034320 | 4.1.1.398 ↗ | beta barrels › SH3 › SH3 › SH3 › YolD | 0.85 | 63.0 | 7.01e-01 | 77.6% | 100.0% |
| 4183853 | 4.1.1.435 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29216 | 0.83 | 62.0 | 6.78e-01 | 77.6% | 100.0% |
| 4058174 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.81 | 59.0 | 6.64e-01 | 87.1% | 98.5% |
| 4574546 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.80 | 58.0 | 6.58e-01 | 77.6% | 100.0% |
| 4940673 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 55.0 | 6.31e-01 | 78.8% | 100.0% |
| 4559371 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 56.0 | 6.35e-01 | 77.6% | 100.0% |
| 4264671 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.75 | 61.0 | 6.31e-01 | 90.6% | 91.3% |
| 3651961 | 4.1.1.251 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5 | 0.75 | 48.0 | 5.70e-01 | 83.5% | 100.0% |
| 3593222 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 56.0 | 5.73e-01 | 78.8% | 100.0% |
| 4122525 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.74 | 59.0 | 6.29e-01 | 91.8% | 96.0% |
| 3586487 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 47.0 | 4.79e-01 | 80.0% | 64.7% |
| 4625654 | 4.1.1.445 ↗ | beta barrels › SH3 › SH3 › SH3 › Spore_GerQ | 0.74 | 55.0 | 5.81e-01 | 78.8% | 92.0% |
| 3671986 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.73 | 47.0 | 5.13e-01 | 77.6% | 80.0% |
| 3616243 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 46.0 | 5.42e-01 | 74.1% | 98.2% |
| 3199259 | 4.1.1.286 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7072 | 0.72 | 48.0 | 5.38e-01 | 76.5% | 90.8% |
| 3535278 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 46.0 | 5.35e-01 | 76.5% | 93.3% |
| 4629022 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.72 | 45.0 | 4.88e-01 | 74.1% | 77.1% |
| 4118552 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.71 | 58.0 | 6.18e-01 | 91.8% | 98.7% |
| 1108894 | 4.1.1.122 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_17 | 0.71 | 45.0 | 5.35e-01 | 70.6% | 100.0% |
| 4026957 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 49.0 | 5.50e-01 | 80.0% | 100.0% |
| 4000280 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 46.0 | 5.31e-01 | 74.1% | 100.0% |
| 3294392 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.71 | 46.0 | 4.70e-01 | 76.5% | 67.1% |
| 3393319 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.71 | 60.0 | 5.50e-01 | 100.0% | 71.8% |
| 3707634 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 45.0 | 5.25e-01 | 75.3% | 100.0% |
| 3910433 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 49.0 | 5.51e-01 | 77.6% | 95.4% |
| 3218198 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 45.0 | 5.26e-01 | 77.6% | 100.0% |
| 3587906 | 4.1.1.46 ↗ | beta barrels › SH3 › SH3 › SH3 › VEG | 0.70 | 54.0 | 5.53e-01 | 82.4% | 98.8% |
| 3913334 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 50.0 | 5.38e-01 | 91.8% | 90.0% |
| 4075769 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.70 | 44.0 | 5.25e-01 | 76.5% | 100.0% |
| 3398093 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.70 | 47.0 | 5.33e-01 | 81.2% | 98.3% |
| 4011604 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.70 | 51.0 | 5.46e-01 | 81.2% | 88.0% |
| 3405627 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 50.0 | 4.88e-01 | 88.2% | 68.4% |
| 3579591 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.69 | 44.0 | 5.18e-01 | 72.9% | 100.0% |
| 3486495 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 47.0 | 3.69e-01 | 78.8% | 34.3% |
| 4524466 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.68 | 46.0 | 4.97e-01 | 77.6% | 84.3% |
| 3221094 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 52.0 | 4.70e-01 | 81.2% | 77.4% |
| 3240406 | 4.1.1.347 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 | 0.68 | 53.0 | 4.85e-01 | 84.7% | 100.0% |
| 3547084 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.68 | 54.0 | 5.33e-01 | 100.0% | 82.2% |
| 4317035 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.68 | 56.0 | 5.62e-01 | 100.0% | 91.8% |
| 3712782 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 45.0 | 4.65e-01 | 77.6% | 72.5% |
| 5038340 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.68 | 51.0 | 5.40e-01 | 81.2% | 90.7% |
| 3881119 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.67 | 55.0 | 5.62e-01 | 100.0% | 95.0% |
| 3840679 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.67 | 57.0 | 5.54e-01 | 100.0% | 85.3% |
| 3482646 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 46.0 | 3.44e-01 | 70.6% | 33.5% |
| 3511375 | 4.1.1.349 ↗ | beta barrels › SH3 › SH3 › SH3 › ROF | 0.67 | 48.0 | 4.88e-01 | 76.5% | 80.0% |
| 3517728 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.66 | 45.0 | 4.89e-01 | 80.0% | 85.7% |
| 3476179 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 46.0 | 4.51e-01 | 87.1% | 65.3% |
| 3389177 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.66 | 55.0 | 5.22e-01 | 100.0% | 78.0% |
| 3244430 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.66 | 57.0 | 5.32e-01 | 100.0% | 78.1% |
| 4002896 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.66 | 55.0 | 5.50e-01 | 100.0% | 90.0% |
| 3504417 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.65 | 57.0 | 5.63e-01 | 98.8% | 91.1% |
| 4420173 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.65 | 47.0 | 4.97e-01 | 84.7% | 86.7% |
| 3554026 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.65 | 44.0 | 5.00e-01 | 74.1% | 100.0% |
| 3881123 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.65 | 54.0 | 5.44e-01 | 100.0% | 91.8% |
| 3795301 | 4.1.1.319 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9 | 0.65 | 46.0 | 4.78e-01 | 85.9% | 80.0% |
| 3999723 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 57.0 | 4.75e-01 | 100.0% | 56.0% |
| 3511337 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.65 | 55.0 | 5.45e-01 | 100.0% | 90.0% |
| 3883159 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.65 | 55.0 | 5.47e-01 | 100.0% | 91.1% |
| 3323530 | 4.1.1.118 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_15 | 0.64 | 47.0 | 5.21e-01 | 76.5% | 100.0% |
| 3999725 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 53.0 | 5.36e-01 | 100.0% | 91.8% |
| 3617355 | 4.1.1.348 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor, SMN_YG-box | 0.64 | 46.0 | 4.45e-01 | 81.2% | 67.4% |
| 3920666 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.64 | 52.0 | 5.12e-01 | 100.0% | 84.4% |
| 3881124 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.64 | 54.0 | 5.31e-01 | 100.0% | 90.0% |
| 3302817 | 4.1.1.362 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2, KOW7_SPT5 | 0.64 | 54.0 | 4.95e-01 | 91.8% | 96.3% |
| 3555931 | 4.1.1.322 ↗ | beta barrels › SH3 › SH3 › SH3 › GPKOW_C | 0.64 | 53.0 | 4.84e-01 | 91.8% | 97.4% |
| 3230082 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.64 | 54.0 | 5.19e-01 | 100.0% | 81.0% |
| 3516048 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 54.0 | 5.19e-01 | 100.0% | 82.0% |
| 3627688 | 4.1.1.319 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9 | 0.63 | 50.0 | 4.23e-01 | 88.2% | 72.7% |
| 3259547 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 51.0 | 4.63e-01 | 87.1% | 87.8% |
| 3198731 | 4.1.1.249 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 | 0.63 | 50.0 | 4.35e-01 | 85.9% | 83.1% |
| 3672445 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 49.0 | 4.17e-01 | 85.9% | 84.8% |
| 3765289 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.63 | 54.0 | 5.39e-01 | 100.0% | 92.2% |
| 3609629 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.63 | 55.0 | 5.39e-01 | 100.0% | 89.5% |
| 3215393 | 4.1.1.319 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9 | 0.62 | 46.0 | 3.88e-01 | 80.0% | 58.7% |
| 3967527 | 4216.1.1.1 ↗ | a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › HemS | 0.62 | 53.0 | 4.22e-01 | 92.9% | 80.5% |
| 4002679 | 4.1.1.322 ↗ | beta barrels › SH3 › SH3 › SH3 › GPKOW_C | 0.62 | 50.0 | 4.49e-01 | 88.2% | 98.3% |
| 3845425 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 52.0 | 5.11e-01 | 100.0% | 90.0% |
| 3217770 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 41.0 | 3.96e-01 | 74.1% | 60.0% |
| 3576438 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 51.0 | 5.06e-01 | 100.0% | 90.0% |
| 4105328 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.61 | 42.0 | 4.67e-01 | 75.3% | 95.4% |
| 3669494 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.60 | 52.0 | 4.37e-01 | 97.6% | 82.0% |
| 3407855 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.60 | 51.0 | 5.03e-01 | 100.0% | 91.1% |
| 4470603 | 4.1.1.217 ↗ | beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 | 0.59 | 51.0 | 4.14e-01 | 96.5% | 87.3% |
| 3520654 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.59 | 48.0 | 4.04e-01 | 90.6% | 83.3% |
| 4137973 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.58 | 45.0 | 4.13e-01 | 83.5% | 98.2% |
| None | — | 0.52 | 40.0 | 2.36e-01 | 83.5% | 78.9% |