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QC4_scaffold_20_prodigal-single.1__X__X__00079

Bact-Vir

QC4_scaffold_20_prodigal-single.1__X__X__00079

Identity

Kingdom:
phage

Quality

59.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-64
PDB
D2 medium residues 65-205
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3e5dA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.60 28.0 2.99e-01 85.1% 48.0%
1gydB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 39.0 3.03e-01 72.3% 60.0%
2w20B01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.53 40.0 2.90e-01 77.3% 60.4%
4zrlA01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.53 32.0 3.49e-01 93.6% 70.9%
4ca1B02 2.60.210.10 Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 0.52 37.0 3.90e-01 73.8% 91.7%
4k15A00 2.60.40.3860 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 36.0 3.70e-01 95.0% 71.7%
6ywnA01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.51 29.0 3.25e-01 93.6% 69.4%
3lf7A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 42.0 3.01e-01 88.7% 93.4%
4d47A00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 42.0 2.96e-01 85.8% 67.6%
4kcaA02 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 37.0 2.73e-01 75.9% 59.3%
5wy8B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 33.0 3.77e-01 93.6% 92.9%
1jmxA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.50 31.0 3.42e-01 72.3% 77.1%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.50 31.0 2.93e-01 82.3% 49.2%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4032294 3389.1.1.1 ↗ a+b two layers › hypothetical protein SAV0303 › hypothetical protein SAV0303 › hypothetical protein SAV0303 › DUF4467 0.61 33.0 3.87e-01 71.6% 74.5%
None — 0.58 28.0 2.41e-01 85.1% 28.0%
3908432 4291.1.1.1 ↗ beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.54 44.0 3.16e-01 87.2% 54.6%
3812208 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 41.0 2.82e-01 78.7% 55.7%
3297678 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 39.0 4.27e-01 83.7% 96.5%
3520574 5.1.2.3 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DPPIV_N 0.51 35.0 3.01e-01 70.2% 75.6%
5052205 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.51 39.0 2.60e-01 82.3% 92.9%
3230843 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.51 35.0 3.99e-01 85.8% 99.0%
3707549 5.1.3.28 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.50 40.0 2.87e-01 84.4% 64.6%
None — 0.50 42.0 2.88e-01 91.5% 81.3%