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QC4_scaffold_20_prodigal-single.1__X__X__00112
Bact-VirQC4_scaffold_20_prodigal-single.1__X__X__00112
Identity
- Kingdom:
- phage
Quality
74.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-84
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ca1B02 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.66 | 49.0 | 4.15e-01 | 77.1% | 73.5% |
| 1sgoA01 | 3.30.2280.10 | Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) | 0.66 | 35.0 | 3.26e-01 | 72.3% | 39.8% |
| 7vd7A01 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.65 | 46.0 | 4.47e-01 | 79.5% | 66.3% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.63 | 47.0 | 3.85e-01 | 79.5% | 81.8% |
| 8gq6A01 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.62 | 42.0 | 2.88e-01 | 80.7% | 19.5% |
| 4gq1A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 53.0 | 3.55e-01 | 98.8% | 74.1% |
| 2z4hA01 | 2.40.128.300 | Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain | 0.55 | 44.0 | 4.58e-01 | 86.7% | 93.7% |
| 3gd6A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.55 | 48.0 | 4.07e-01 | 100.0% | 95.8% |
| 3r87A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 40.0 | 3.54e-01 | 79.5% | 100.0% |
| 1vkdA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 48.0 | 3.27e-01 | 100.0% | 74.5% |
| 1wlgA02 | 2.60.98.20 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE | 0.54 | 42.0 | 3.62e-01 | 85.5% | 71.4% |
| 3ddmA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 39.0 | 3.46e-01 | 79.5% | 90.4% |
| 1w0pA03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 46.0 | 3.57e-01 | 98.8% | 75.4% |
| 4mlgG00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 43.0 | 3.01e-01 | 95.2% | 68.8% |
| 3r8eA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 39.0 | 3.36e-01 | 83.1% | 100.0% |
| 4fdtB00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.51 | 36.0 | 2.36e-01 | 73.5% | 64.1% |
| 6guuA01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 30.0 | 3.51e-01 | 100.0% | 88.9% |
| 3mx7A00 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 44.0 | 4.30e-01 | 97.6% | 96.7% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5006845 | 295.1.1.27 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PF25991 | 0.71 | 42.0 | 5.02e-01 | 72.3% | 89.1% |
| 3446029 | 859.1.1.1 ↗ | a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › HORMA | 0.67 | 46.0 | 3.72e-01 | 71.1% | 38.7% |
| 3178413 | 220.1.1.69 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Meiotic_rec114 | 0.66 | 48.0 | 4.08e-01 | 75.9% | 95.6% |
| 4207211 | 511.1.1.1 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 | 0.66 | 45.0 | 3.65e-01 | 71.1% | 60.6% |
| 4973139 | 511.1.1.0 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain | 0.65 | 45.0 | 3.60e-01 | 71.1% | 60.0% |
| 3381414 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.64 | 48.0 | 3.85e-01 | 78.3% | 54.8% |
| 4370161 | 511.1.1.1 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 | 0.63 | 44.0 | 3.47e-01 | 71.1% | 58.1% |
| 3471995 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.62 | 42.0 | 4.05e-01 | 71.1% | 61.1% |
| 3532938 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.62 | 54.0 | 3.48e-01 | 95.2% | 63.2% |
| 3388794 | 71.2.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like | 0.60 | 54.0 | 3.90e-01 | 100.0% | 98.3% |
| 3882163 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 41.0 | 2.90e-01 | 72.3% | 51.4% |
| 3279044 | 2.1.1.314 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF27099 | 0.58 | 33.0 | 3.69e-01 | 100.0% | 72.3% |
| 3720627 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.58 | 52.0 | 3.32e-01 | 100.0% | 69.9% |
| 3460551 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.58 | 39.0 | 4.17e-01 | 79.5% | 82.9% |
| 3230195 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 50.0 | 3.36e-01 | 100.0% | 87.5% |
| 3420430 | 511.1.1.1 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 | 0.57 | 41.0 | 3.47e-01 | 74.7% | 72.6% |
| 3390600 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.56 | 39.0 | 4.07e-01 | 80.7% | 80.0% |
| 3698019 | 11.8.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like | 0.56 | 44.0 | 3.66e-01 | 84.3% | 56.6% |
| 3741657 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.56 | 41.0 | 3.75e-01 | 79.5% | 97.4% |
| 3933565 | 5.1.4.229 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_EMC1_N | 0.55 | 47.0 | 3.11e-01 | 100.0% | 82.1% |
| 3253837 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 47.0 | 3.16e-01 | 100.0% | 71.5% |
| 3421658 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 42.0 | 4.24e-01 | 90.4% | 83.5% |
| 3809146 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.54 | 42.0 | 4.14e-01 | 86.7% | 93.3% |
| 3959649 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.53 | 36.0 | 2.80e-01 | 71.1% | 54.2% |
| 3935844 | 5.1.3.204 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF7911 | 0.52 | 41.0 | 2.81e-01 | 88.0% | 78.2% |
| 4464751 | 4041.1.1.0 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase | 0.52 | 45.0 | 3.58e-01 | 97.6% | 89.4% |
| 3791563 | 5.1.2.45 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DUF7911 | 0.52 | 43.0 | 3.00e-01 | 94.0% | 56.7% |
| 5018514 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 39.0 | 3.40e-01 | 83.1% | 100.0% |
| 3307236 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 40.0 | 3.61e-01 | 88.0% | 97.5% |
| 4987228 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.51 | 46.0 | 3.63e-01 | 100.0% | 75.1% |
| 3585414 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.50 | 39.0 | 3.50e-01 | 80.7% | 74.5% |