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QC4_scaffold_20_prodigal-single.1__X__X__00149
Bact-VirQC4_scaffold_20_prodigal-single.1__X__X__00149
Identity
- Kingdom:
- phage
Quality
79.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-67
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f2gA00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.75 | 67.0 | 4.35e-01 | 100.0% | 24.2% |
| 3pltA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.70 | 60.0 | 4.02e-01 | 100.0% | 23.8% |
| 1vhnA02 | 1.10.1200.80 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Putative flavin oxidoreducatase; domain 2 | 0.70 | 56.0 | 5.04e-01 | 88.2% | 100.0% |
| 2rkhA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.69 | 57.0 | 5.04e-01 | 100.0% | 61.8% |
| 3iylU02 | 1.10.287.1520 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.69 | 54.0 | 5.43e-01 | 94.1% | 92.5% |
| 1ij5A01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 60.0 | 5.27e-01 | 100.0% | 77.6% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 58.0 | 5.24e-01 | 98.0% | 75.3% |
| 2yevC00 | 6.10.280.110 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 58.0 | 5.41e-01 | 94.1% | 100.0% |
| 2db7A01 | 6.10.250.980 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.68 | 50.0 | 4.98e-01 | 86.3% | 81.1% |
| 4wzxA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.67 | 53.0 | 4.75e-01 | 98.0% | 61.3% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.64 | 54.0 | 4.80e-01 | 100.0% | 66.7% |
| 4a4kA01 | 1.20.1500.20 | Mainly Alpha › Up-down Bundle › YheA-like fold › | 0.63 | 52.0 | 4.05e-01 | 96.1% | 41.6% |
| 1o7dC01 | 1.20.1270.50 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain | 0.61 | 51.0 | 4.90e-01 | 98.0% | 82.0% |
| 1vk0A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.58 | 48.0 | 3.25e-01 | 94.1% | 24.5% |
| 3q23A04 | 6.10.140.1370 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 37.0 | 3.19e-01 | 80.4% | 41.8% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3785883 | 4177.1.1.97 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › PF30147 | 0.81 | 73.0 | 4.86e-01 | 100.0% | 62.7% |
| 3402374 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.76 | 68.0 | 4.95e-01 | 100.0% | 38.5% |
| 3791227 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.73 | 55.0 | 4.74e-01 | 80.4% | 61.5% |
| 5054703 | 7512.1.1.18 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycogen_syn | 0.73 | 60.0 | 3.65e-01 | 96.1% | 14.6% |
| 3900975 | 604.1.1.92 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SR_desmoplakin_3 | 0.73 | 63.0 | 4.73e-01 | 100.0% | 40.0% |
| 3855782 | 604.1.1.92 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SR_desmoplakin_3 | 0.72 | 63.0 | 4.78e-01 | 100.0% | 49.2% |
| 1877523 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.71 | 60.0 | 4.76e-01 | 100.0% | 46.4% |
| 3748412 | 604.1.1.92 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SR_desmoplakin_3 | 0.71 | 61.0 | 4.73e-01 | 100.0% | 45.2% |
| 3883667 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.70 | 61.0 | 4.87e-01 | 100.0% | 49.5% |
| 3588291 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.70 | 60.0 | 5.17e-01 | 100.0% | 61.3% |
| 4133182 | 5043.2.1.10 ↗ | extended segments › Sensor proteins transmembrane domains › NarQ transmembrane domain › NarQ transmembrane domain › HAMP | 0.69 | 59.0 | 4.69e-01 | 100.0% | 48.2% |
| 3924041 | 605.1.1.212 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › 2TM_P5A-ATPase | 0.68 | 57.0 | 5.37e-01 | 100.0% | 78.5% |
| 3750377 | 605.1.1.254 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › MRVI1 | 0.68 | 57.0 | 5.04e-01 | 100.0% | 65.0% |
| 3351064 | 540.1.1.1 ↗ | few secondary structure elements › Cytochrome c oxidase subunit h › Cytochrome c oxidase subunit h › Cytochrome c oxidase subunit h › COX6B | 0.68 | 49.0 | 4.52e-01 | 76.5% | 60.0% |
| 3477822 | 1147.1.1.1 ↗ | alpha bundles › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › Occludin_ELL | 0.68 | 60.0 | 4.51e-01 | 100.0% | 41.6% |
| 2636640 | 192.15.1.3 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Vps23_core | 0.67 | 56.0 | 5.03e-01 | 100.0% | 72.7% |
| 4972207 | 601.28.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like | 0.67 | 55.0 | 4.60e-01 | 92.2% | 52.2% |
| 3709400 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 52.0 | 3.53e-01 | 94.1% | 21.4% |
| 3806609 | 540.1.1.1 ↗ | few secondary structure elements › Cytochrome c oxidase subunit h › Cytochrome c oxidase subunit h › Cytochrome c oxidase subunit h › COX6B | 0.66 | 48.0 | 4.18e-01 | 76.5% | 52.0% |
| 3427778 | 604.1.1.144 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF26575 | 0.66 | 55.0 | 4.83e-01 | 98.0% | 63.7% |
| 3248074 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.66 | 56.0 | 4.06e-01 | 100.0% | 33.5% |
| 3610706 | 3602.1.1.0 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain | 0.66 | 55.0 | 4.88e-01 | 100.0% | 65.0% |
| 3349811 | 3652.1.1.3 ↗ | alpha duplicates or obligate multimers › Qua1 › Qua1 › Qua1 › PF26575 | 0.66 | 51.0 | 5.38e-01 | 84.3% | 95.6% |
| 3541668 | 192.31.1.7 ↗ | alpha bundles › Long alpha-hairpin › CP12 › CP12 › PF28906 | 0.66 | 56.0 | 5.04e-01 | 96.1% | 70.0% |
| 3723174 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.65 | 56.0 | 4.99e-01 | 100.0% | 74.7% |
| 3657787 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 55.0 | 3.70e-01 | 100.0% | 24.2% |
| 5010996 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.65 | 48.0 | 4.58e-01 | 92.2% | 67.7% |
| 4089827 | 192.1.1.34 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › DUF444 | 0.64 | 54.0 | 4.87e-01 | 100.0% | 68.0% |