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QC4_scaffold_20_prodigal-single.1__X__X__00202
Bact-VirQC4_scaffold_20_prodigal-single.1__X__X__00202
Identity
- Kingdom:
- phage
Quality
75.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 15-78
Domain cluster:
rep: LC597490.1__BCO16143.1__X__00090__D38-94
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zs8A01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.75 | 52.0 | 3.76e-01 | 71.9% | 76.6% |
| 3pqhA01 | 2.20.220.20 | Mainly Beta › Single Sheet › Glycosyl hydrolase fold › | 0.74 | 56.0 | 5.81e-01 | 84.4% | 85.0% |
| 4ld1A00 | 2.60.450.20 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › | 0.74 | 53.0 | 3.97e-01 | 76.6% | 31.8% |
| 2q74A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.66 | 53.0 | 4.26e-01 | 89.1% | 65.9% |
| 4n9jA02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.66 | 48.0 | 4.04e-01 | 76.6% | 45.8% |
| 4by2B00 | 2.60.450.20 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › | 0.63 | 55.0 | 4.20e-01 | 100.0% | 87.1% |
| 4tkcA00 | 2.90.10.10 | Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain | 0.63 | 45.0 | 3.69e-01 | 76.6% | 99.2% |
| 2ogqA01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.63 | 46.0 | 3.72e-01 | 79.7% | 70.6% |
| 2m7oA00 | 3.10.450.400 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Uncharacterised protein PF15513, DUF4651 | 0.62 | 44.0 | 4.36e-01 | 76.6% | 87.1% |
| 2f2hA01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.61 | 44.0 | 2.98e-01 | 76.6% | 44.9% |
| 4g7nA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.61 | 44.0 | 3.59e-01 | 76.6% | 62.0% |
| 3m2tA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.59 | 49.0 | 3.87e-01 | 98.4% | 72.4% |
| 7wffb01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.59 | 49.0 | 3.22e-01 | 95.3% | 98.7% |
| 4g7nA02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.59 | 43.0 | 3.79e-01 | 82.8% | 51.5% |
| 4r7rA00 | 3.30.1490.410 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 | 0.58 | 39.0 | 3.23e-01 | 71.9% | 68.9% |
| 8adbA01 | 3.90.70.120 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.58 | 47.0 | 3.28e-01 | 89.1% | 36.7% |
| 1xipA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 43.0 | 2.76e-01 | 85.9% | 22.9% |
| 1kcgC00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.55 | 46.0 | 3.51e-01 | 98.4% | 49.4% |
| 4a2lF02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 44.0 | 2.88e-01 | 92.2% | 32.6% |
| 8ew8A01 | 3.50.70.10 | Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › | 0.54 | 42.0 | 2.95e-01 | 87.5% | 78.4% |
| 6bm0A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 45.0 | 2.84e-01 | 95.3% | 47.7% |
| 2wj9B00 | 3.30.70.3580 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Antirestriction protein | 0.54 | 36.0 | 2.83e-01 | 70.3% | 68.3% |
| 3c5mA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 42.0 | 2.71e-01 | 95.3% | 33.0% |
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.52 | 41.0 | 3.28e-01 | 92.2% | 61.0% |
| 2m3xC02 | 2.40.10.360 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.52 | 40.0 | 3.90e-01 | 82.8% | 97.1% |
| 3r90A00 | 3.10.400.20 | Alpha Beta › Roll › Sulfate adenylyltransferase › | 0.52 | 42.0 | 3.18e-01 | 96.9% | 71.9% |
| 2xepB01 | 3.10.450.280 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 36.0 | 3.09e-01 | 76.6% | 83.3% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3717674 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.75 | 50.0 | 4.45e-01 | 73.4% | 48.9% |
| 3504473 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.74 | 54.0 | 3.87e-01 | 76.6% | 28.9% |
| 3619159 | 292.2.1.5 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Polo_box_3 | 0.72 | 49.0 | 4.29e-01 | 71.9% | 53.7% |
| 4025709 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.69 | 48.0 | 4.83e-01 | 73.4% | 78.5% |
| 3912697 | 292.2.1.3 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Plk4_PB2 | 0.69 | 50.0 | 4.16e-01 | 76.6% | 44.5% |
| 3935058 | 292.2.1.5 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Polo_box_3 | 0.65 | 47.0 | 4.27e-01 | 76.6% | 57.6% |
| 3856612 | 319.1.1.9 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › DPCD | 0.64 | 48.0 | 3.49e-01 | 81.2% | 34.1% |
| 3244934 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.64 | 49.0 | 3.07e-01 | 81.2% | 16.7% |
| None | — | 0.63 | 52.0 | 3.31e-01 | 90.6% | 32.1% | |
| 3711004 | 77.3.1.1 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › Tcp10_C | 0.62 | 54.0 | 4.32e-01 | 95.3% | 55.2% |
| 3875597 | 77.3.1.0 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain | 0.62 | 51.0 | 3.15e-01 | 90.6% | 57.2% |
| 4609923 | 77.3.1.4 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › PF28998 | 0.61 | 55.0 | 4.24e-01 | 98.4% | 65.2% |
| 3631797 | 5.1.4.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 | 0.60 | 48.0 | 3.08e-01 | 87.5% | 30.8% |
| 4030008 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 44.0 | 2.87e-01 | 81.2% | 29.8% |
| 3338126 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.59 | 45.0 | 3.07e-01 | 84.4% | 52.5% |
| 3924468 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.58 | 45.0 | 2.88e-01 | 85.9% | 43.4% |
| 3676249 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.57 | 45.0 | 3.92e-01 | 90.6% | 71.8% |
| 3803793 | 5.1.5.66 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 | 0.57 | 44.0 | 2.90e-01 | 85.9% | 24.1% |
| 3222917 | 220.1.1.29 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_3 | 0.57 | 44.0 | 3.15e-01 | 84.4% | 67.4% |
| 3785266 | 243.6.1.4 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA | 0.56 | 41.0 | 3.65e-01 | 78.1% | 86.3% |
| 3608449 | 5.1.4.235 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_1st | 0.56 | 48.0 | 2.93e-01 | 98.4% | 50.3% |
| 3716768 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.56 | 45.0 | 2.79e-01 | 87.5% | 69.2% |
| 5045984 | 243.6.1.1 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 | 0.56 | 40.0 | 3.68e-01 | 76.6% | 87.1% |
| 3811228 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.56 | 43.0 | 2.82e-01 | 85.9% | 21.0% |
| 3276359 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 44.0 | 2.81e-01 | 92.2% | 35.3% |
| 3298515 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.54 | 43.0 | 3.63e-01 | 90.6% | 64.3% |
| 3429037 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.54 | 43.0 | 2.81e-01 | 90.6% | 33.5% |
| 4634766 | 4041.1.1.0 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase | 0.54 | 40.0 | 3.03e-01 | 81.2% | 64.4% |
| 3384630 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.53 | 44.0 | 3.00e-01 | 95.3% | 52.2% |
| 3793797 | 5.1.5.93 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_EMC1_N | 0.53 | 44.0 | 2.89e-01 | 96.9% | 52.2% |
| 4019353 | 243.6.1.4 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA | 0.52 | 38.0 | 3.42e-01 | 78.1% | 85.6% |