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REP_protein
Euk-VirDesmodium_leaf_distortion_virus
REP_protein__YP_794171__Desmodium_leaf_distortion_virus__361731
Identity
- Accession:
- YP_794171 ↗
- Protein ID:
- REP_protein
- Kingdom:
- euk
Quality
81.7
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Repensiviricetes›
Geplafuvirales›
Geminiviridae›
Begomovirus›
Desmodium_leaf_distortion_virus
TaxID: 361731
Cluster
View cluster (491 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-116
Domain cluster:
rep: replication-associated_protein__YP_009553348__Odonata-associated_circular_virus-7_Viruses.__X__D5-106
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00799.27 best | Gemini_AL1 | 138.5 | 1.30e-40 | 100.0% | 92.9% |
D2
high
residues 188-337
Domain cluster:
rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 57.7 | 1.60e-15 | 28.0% | 39.2% |
D3
medium
residues 123-187
Domain cluster:
rep: replication_initiator_protein__YP_009241413__Deinbollia_mosaic_virus__1812308__D128-173
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 51.3 | 1.50e-13 | 100.0% | 59.8% |