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REP_protein
Euk-VirSida_yellow_mosaic_Yucatan_virus
REP_protein__YP_980246__Sida_yellow_mosaic_Yucatan_virus__408719
Identity
- Accession:
- YP_980246 ↗
- Protein ID:
- REP_protein
- Kingdom:
- euk
Quality
82.4
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Repensiviricetes›
Geplafuvirales›
Geminiviridae›
Begomovirus›
Sida_yellow_mosaic_Yucatan_virus
TaxID: 408719
Cluster
View cluster (491 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-114
Domain cluster:
rep: replication-associated_protein__YP_009553348__Odonata-associated_circular_virus-7_Viruses.__X__D5-106
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00799.27 best | Gemini_AL1 | 197.2 | 7.80e-59 | 100.0% | 92.9% |
D2
high
residues 187-339
Domain cluster:
rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 61.6 | 9.90e-17 | 29.4% | 42.1% |