←Back to structures
REp
Euk-VirTomato_yellow_leaf_deformation_dwarf_virus
REp__YP_010087801__Tomato_yellow_leaf_deformation_dwarf_virus__2712846
Identity
- Accession:
- YP_010087801 ↗
- Protein ID:
- REp
- Kingdom:
- euk
Quality
80.9
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Repensiviricetes›
Geplafuvirales›
Geminiviridae›
Begomovirus›
Tomato_yellow_leaf_deformation_dwarf_virus
TaxID: 2712846
Cluster
View cluster (491 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-116
Domain cluster:
rep: AC1_protein__NP_955735__Euphorbia_leaf_curl_virus__270117__D7-112
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00799.27 best | Gemini_AL1 | 136.0 | 7.60e-40 | 100.0% | 92.9% |
D2
high
residues 186-342
Domain cluster:
rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 49.3 | 6.60e-13 | 31.2% | 41.1% |
D3
medium
residues 122-185
Domain cluster:
rep: replication_initiator_protein__YP_009241413__Deinbollia_mosaic_virus__1812308__D128-173
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08283.17 best | Gemini_AL1_M | 62.6 | 4.80e-17 | 98.4% | 57.9% |