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RF4.1

Euk-Vir

Retroperitoneal_fibromatosis-associated_herpesvirus

RF4.1__YP_010084376__Retroperitoneal_fibromatosis-associated_herpesvirus__111469

Identity

Accession:
YP_010084376 ↗
Protein ID:
RF4.1
Kingdom:
euk

Quality

75.8 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Rhadinovirus› Retroperitoneal_fibromatosis-associated_herpesvirus

TaxID: 111469

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 34-101
PDB
Domain cluster: rep: CxC_chemokine__YP_001033995__Gallid_alphaherpesvirus_2__10390__D33-100
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00048.26 best IL8 36.2 7.40e-09 80.9% 71.7%
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zxtA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.92 75.0 7.94e-01 85.3% 95.1%
1eqtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.90 71.0 7.15e-01 82.4% 83.6%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.89 70.0 7.10e-01 82.4% 84.8%
1eotA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.84 66.0 6.44e-01 83.8% 78.4%
4oijA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.83 72.0 7.10e-01 95.6% 88.7%
1f9qD00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.80 62.0 6.28e-01 82.4% 86.4%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.80 63.0 6.40e-01 85.3% 92.4%
5wb2B00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.80 64.0 6.31e-01 86.8% 82.2%
2mp1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.78 65.0 6.24e-01 89.7% 89.6%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.78 62.0 6.30e-01 86.8% 94.0%
1eigA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.76 61.0 5.97e-01 86.8% 82.2%
2kumA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.75 52.0 5.59e-01 72.1% 89.5%
5cbeE00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.75 55.0 5.68e-01 77.9% 85.9%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 53.0 4.54e-01 82.4% 76.1%
4fnfA00 2.40.50.50 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 47.0 4.19e-01 72.1% 57.1%
1b44D00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 46.0 4.02e-01 72.1% 56.6%
3pvlA04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 51.0 4.51e-01 82.4% 84.8%
2cy5A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 49.0 4.07e-01 82.4% 90.7%
2dhjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 48.0 4.04e-01 82.4% 80.0%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.64 44.0 4.71e-01 73.5% 83.1%
1x1fA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 47.0 3.71e-01 80.9% 58.4%
1btkA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 54.0 4.20e-01 100.0% 90.6%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 44.0 4.77e-01 85.3% 94.6%
2re3A02 2.30.270.10 Mainly Beta › Roll › duf1285 protein fold › duf1285 protein 0.61 42.0 4.20e-01 72.1% 100.0%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 44.0 4.58e-01 76.5% 88.5%
5t1dB00 3.10.390.20 Alpha Beta › Roll › SAND domain › Viral glycoprotein L 0.60 46.0 4.09e-01 83.8% 70.7%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 41.0 4.29e-01 73.5% 80.6%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 44.0 3.85e-01 82.4% 88.9%
3fm8D03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 44.0 3.86e-01 82.4% 84.3%
4egvA02 2.40.50.840 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 40.0 3.90e-01 72.1% 66.7%
1oqkA00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.58 37.0 3.54e-01 79.4% 55.1%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.58 39.0 3.22e-01 70.6% 81.5%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 35.0 4.00e-01 70.6% 87.8%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 37.0 3.83e-01 85.3% 72.7%
3ab1B01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 43.0 3.12e-01 86.8% 63.7%
3d31A03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.55 42.0 4.18e-01 82.4% 85.9%
4fd0A01 2.60.40.3630 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 37.0 3.60e-01 70.6% 91.1%
1bqnA05 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.55 42.0 3.47e-01 83.8% 87.0%
1vq8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 40.0 3.89e-01 85.3% 70.5%
5aj3P00 3.30.1320.10 Alpha Beta › 2-Layer Sandwich › S16 Ribosomal Protein; Chain: A; › Ribosomal protein S16 0.54 36.0 3.14e-01 72.1% 61.5%
2e8yA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 37.0 3.29e-01 73.5% 81.2%
3mkcA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 39.0 3.05e-01 77.9% 88.9%
2epbA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 38.0 3.84e-01 77.9% 85.3%
6bm0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 44.0 2.75e-01 92.6% 23.3%
2kqfA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.52 38.0 3.47e-01 79.4% 85.4%
5hy7B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 43.0 2.69e-01 94.1% 27.9%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.52 35.0 3.59e-01 75.0% 71.6%
1h91A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 40.0 3.06e-01 91.2% 76.7%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 41.0 2.67e-01 91.2% 25.6%
5cxbA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 42.0 2.66e-01 92.6% 20.8%
1bf5A04 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.50 34.0 3.01e-01 72.1% 66.4%
ECOD (82)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3912274 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.93 74.0 7.31e-01 82.4% 80.0%
3896688 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.90 70.0 7.48e-01 82.4% 93.3%
3856611 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.89 67.0 7.01e-01 79.4% 85.7%
3911547 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.89 72.0 6.59e-01 85.3% 74.1%
3842884 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.88 73.0 7.31e-01 86.8% 88.2%
3880422 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.88 69.0 6.99e-01 82.4% 82.4%
3894506 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.88 71.0 7.03e-01 83.8% 81.4%
3890480 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.88 69.0 6.68e-01 82.4% 80.0%
665 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.88 69.0 6.99e-01 82.4% 83.6%
3894564 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.88 69.0 6.38e-01 82.4% 69.9%
4424678 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.88 70.0 7.21e-01 83.8% 90.8%
3761120 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.87 68.0 6.95e-01 82.4% 87.7%
3541613 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.87 72.0 7.28e-01 89.7% 88.2%
3764537 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.86 69.0 6.54e-01 85.3% 75.0%
3556735 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.82 70.0 6.88e-01 94.1% 86.3%
1032344 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.81 62.0 5.86e-01 82.4% 70.4%
3891033 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.78 63.0 6.16e-01 86.8% 86.3%
1094905 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.78 63.0 6.29e-01 88.2% 91.4%
3869511 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.76 62.0 5.58e-01 89.7% 93.7%
659 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.76 61.0 5.97e-01 86.8% 82.2%
2095508 1170.1.2.4 ↗ beta barrels › IL8-related › IL8-related › chemokine-related domain in glycoprotein L (gL) › Gp_UL130 0.75 58.0 5.65e-01 82.4% 85.1%
5054192 802.1.1.0 ↗ a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.71 57.0 5.01e-01 86.8% 65.0%
3347210 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 50.0 4.63e-01 75.0% 92.0%
5023580 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 51.0 5.27e-01 76.5% 100.0%
3596312 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.70 54.0 4.34e-01 82.4% 63.1%
3422528 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 50.0 5.27e-01 75.0% 93.3%
3270836 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.70 52.0 4.34e-01 79.4% 73.0%
3903260 109.4.1.2707 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PH_21 0.69 49.0 2.96e-01 73.5% 14.5%
3927128 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 51.0 4.27e-01 79.4% 80.8%
4949942 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 49.0 4.58e-01 76.5% 90.9%
3567875 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.69 51.0 3.94e-01 80.9% 55.0%
3627778 220.1.1.64 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C1_MyoVII 0.69 52.0 4.61e-01 82.4% 84.0%
5022340 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 49.0 4.87e-01 75.0% 100.0%
3810543 220.1.1.20 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.68 52.0 4.45e-01 82.4% 77.3%
3710438 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.68 52.0 4.37e-01 82.4% 83.5%
3779393 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.68 51.0 4.19e-01 82.4% 65.4%
3893746 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.68 51.0 4.08e-01 82.4% 60.7%
3707723 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 53.0 4.64e-01 86.8% 90.5%
4203238 220.1.1.217 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH, GRAM 0.67 50.0 3.47e-01 82.4% 34.8%
4186865 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.67 51.0 3.38e-01 82.4% 30.5%
3393858 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 49.0 4.16e-01 79.4% 90.4%
3924612 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.66 50.0 4.06e-01 82.4% 58.5%
4667221 2003.1.2.8 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2,Pyr_redox_2 0.66 52.0 3.74e-01 85.3% 69.1%
3679866 2003.1.2.16 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.66 50.0 3.04e-01 80.9% 40.0%
3471641 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 55.0 4.52e-01 92.6% 92.0%
4674129 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 50.0 4.35e-01 82.4% 79.0%
None — 0.65 51.0 3.15e-01 83.8% 53.8%
3692872 244.1.1.6 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.65 51.0 3.06e-01 85.3% 60.7%
3785491 220.1.1.26 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Vps36_ESCRT-II 0.65 48.0 3.92e-01 79.4% 68.5%
3512851 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 48.0 3.88e-01 80.9% 74.1%
4014812 4.8.1.2 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.64 47.0 4.95e-01 77.9% 91.7%
3744198 220.1.1.26 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Vps36_ESCRT-II 0.64 48.0 4.01e-01 80.9% 75.0%
3439990 220.1.1.76 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.64 48.0 4.42e-01 80.9% 90.0%
5036411 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 48.0 3.92e-01 82.4% 76.9%
3364309 220.1.1.76 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.63 47.0 3.74e-01 77.9% 55.4%
4315771 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.61 44.0 4.53e-01 82.4% 80.0%
4208450 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 44.0 4.61e-01 82.4% 86.7%
4932378 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 43.0 4.53e-01 82.4% 85.0%
3241447 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.61 45.0 3.76e-01 79.4% 90.0%
3422909 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.61 43.0 3.01e-01 75.0% 23.1%
4231809 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.61 43.0 2.57e-01 75.0% 51.2%
3709493 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 43.0 3.50e-01 83.8% 40.8%
4973274 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.57 42.0 4.52e-01 83.8% 98.2%
4399169 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.57 42.0 4.41e-01 80.9% 90.0%
5035086 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.56 41.0 4.37e-01 82.4% 90.0%
3279119 4090.1.1.0 ↗ a+b two layers › BH3703-like › BH3703-like › BH3703-like 0.55 41.0 3.26e-01 77.9% 55.6%
4461475 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 41.0 4.09e-01 85.3% 78.6%
4149372 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 40.0 4.15e-01 82.4% 83.1%
4071167 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 42.0 4.18e-01 82.4% 82.9%
4602962 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.55 42.0 3.34e-01 85.3% 56.0%
3738254 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.55 40.0 2.95e-01 77.9% 83.9%
2642946 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.55 41.0 3.78e-01 82.4% 64.8%
5054268 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.55 40.0 4.11e-01 82.4% 83.1%
4928706 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.54 41.0 4.13e-01 82.4% 81.4%
4053455 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.54 41.0 4.11e-01 82.4% 85.7%
4945674 2.1.1.252 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2_C 0.54 41.0 4.15e-01 86.8% 82.9%
4949063 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.54 39.0 3.44e-01 82.4% 53.5%
4940372 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.53 41.0 4.09e-01 86.8% 82.9%
4951338 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.52 38.0 3.32e-01 83.8% 87.5%
3512816 5.1.4.313 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_BBS7 0.51 42.0 2.71e-01 94.1% 28.9%
3247746 5.1.4.303 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BBS2_N, BBS2_Mid 0.51 42.0 2.75e-01 92.6% 26.9%
3483569 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 41.0 2.57e-01 92.6% 30.1%