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RH5
Euk-VirBovine_adenovirus_6
RH5__YP_007347019__Bovine_adenovirus_6__111167
Identity
- Accession:
- YP_007347019 ↗
- Protein ID:
- RH5
- Kingdom:
- euk
Quality
71.7
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Barthadenovirus›
Bovine_adenovirus_6
TaxID: 111167
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-44_62-91_158-169
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ltrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.63 | 45.0 | 4.25e-01 | 77.9% | 61.9% |
| 2db2A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 43.0 | 4.20e-01 | 76.7% | 76.6% |
| 3i9v700 | 3.30.920.80 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › NADH-quinone oxidoreductase, subunit 15 | 0.59 | 47.0 | 4.11e-01 | 86.0% | 93.7% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.58 | 46.0 | 3.89e-01 | 86.0% | 84.4% |
| 1gkkA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 46.0 | 3.25e-01 | 87.2% | 75.3% |
| 2qmqA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 43.0 | 3.05e-01 | 87.2% | 87.8% |
| 2jwyA01 | 2.60.40.1620 | Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like | 0.54 | 42.0 | 3.73e-01 | 88.4% | 98.5% |
| 4hs5A00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.52 | 41.0 | 3.89e-01 | 86.0% | 87.6% |
| 1js3A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 40.0 | 3.90e-01 | 86.0% | 97.9% |
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.51 | 39.0 | 3.67e-01 | 83.7% | 85.3% |
| 3f1yA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.51 | 44.0 | 2.99e-01 | 97.7% | 60.4% |
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.50 | 40.0 | 3.83e-01 | 86.0% | 96.9% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3234330 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.63 | 45.0 | 4.17e-01 | 77.9% | 59.1% |
| 4221510 | 7581.1.1.30 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N, ketoacyl-synt, Thiolase_C | 0.55 | 49.0 | 3.19e-01 | 100.0% | 93.8% |
| 4515677 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.55 | 42.0 | 3.88e-01 | 83.7% | 83.3% |
| 3540354 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.54 | 39.0 | 4.28e-01 | 80.2% | 98.5% |
| 1397674 | 7581.1.1.33 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N, ketoacyl-synt, SpoVAD | 0.54 | 43.0 | 3.05e-01 | 86.0% | 88.8% |
| 4143716 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.53 | 40.0 | 3.76e-01 | 83.7% | 85.5% |
| 3241180 | 7581.1.1.19 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N+Thiolase_C | 0.53 | 46.0 | 3.08e-01 | 100.0% | 93.4% |
| 3821875 | 3887.2.1.1 ↗ | a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung | 0.52 | 38.0 | 3.66e-01 | 79.1% | 81.0% |
| 3839750 | 2003.1.15.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Glycosyltransferase Maf N-terminal domain | 0.51 | 41.0 | 3.20e-01 | 91.9% | 92.4% |
| 3970136 | 241.2.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like | 0.51 | 39.0 | 3.74e-01 | 86.0% | 89.5% |
| 4028604 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.51 | 38.0 | 3.22e-01 | 81.4% | 68.0% |
| 3733997 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.51 | 40.0 | 3.55e-01 | 86.0% | 95.2% |
D2
medium
residues 45-61_92-157_170-202
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lkoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 41.0 | 3.85e-01 | 90.5% | 62.3% |
| 1epaA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 39.0 | 3.55e-01 | 73.3% | 63.7% |
| 5z1gB01 | 3.40.50.10480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain | 0.55 | 43.0 | 3.55e-01 | 82.8% | 87.7% |
| 1dfvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 39.0 | 3.40e-01 | 73.3% | 60.7% |
| 5c0pA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.54 | 41.0 | 3.08e-01 | 79.3% | 51.4% |
| 7jvhC01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.54 | 48.0 | 3.53e-01 | 100.0% | 95.8% |
| 6izcA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.54 | 47.0 | 3.62e-01 | 95.7% | 97.0% |
| 3v3sA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.54 | 47.0 | 3.62e-01 | 96.6% | 96.7% |
| 4oddA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 37.0 | 3.48e-01 | 73.3% | 67.8% |
| 4wfvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 37.0 | 3.43e-01 | 73.3% | 66.7% |
| 2kt4B01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 37.0 | 3.49e-01 | 73.3% | 71.1% |
| 1mwsA04 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.52 | 46.0 | 3.37e-01 | 99.1% | 97.0% |
| 6mlyB01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 38.0 | 2.96e-01 | 76.7% | 49.2% |
| 1nrfA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.52 | 47.0 | 3.67e-01 | 100.0% | 97.2% |
| 2xepB02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.52 | 44.0 | 3.46e-01 | 94.8% | 96.5% |
| 3rjuA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 45.0 | 3.29e-01 | 100.0% | 98.0% |
| 2wuqB00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 44.0 | 3.35e-01 | 94.8% | 94.7% |
| 3p09A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 45.0 | 3.43e-01 | 94.8% | 97.7% |
| 1lf7A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 36.0 | 3.22e-01 | 72.4% | 56.7% |
| 6bn3A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 45.0 | 3.49e-01 | 98.3% | 88.0% |
| 4mnrA02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 44.0 | 3.29e-01 | 97.4% | 97.8% |
| 1mdcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 36.0 | 3.53e-01 | 74.1% | 76.3% |
| 3wa5B00 | 2.60.120.1690 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 45.0 | 4.43e-01 | 97.4% | 89.5% |
| 6xrbA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.50 | 45.0 | 4.24e-01 | 99.1% | 89.2% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3514856 | 1181.1.1.0 ↗ | 0.64 | 28.0 | 3.51e-01 | 75.0% | 64.0% | |
| 3406485 | 1181.1.1.0 ↗ | 0.59 | 30.0 | 3.80e-01 | 78.4% | 81.4% | |
| 3954152 | 223.3.1.0 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins | 0.58 | 53.0 | 4.10e-01 | 100.0% | 97.6% |
| 5026576 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.56 | 31.0 | 3.66e-01 | 75.9% | 75.3% |
| 3273247 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.56 | 42.0 | 3.86e-01 | 77.6% | 84.7% |
| 5047051 | 5.1.4.663 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › SBBP | 0.55 | 41.0 | 2.87e-01 | 77.6% | 93.5% |
| 5055513 | 220.5.1.1 ↗ | beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N | 0.54 | 38.0 | 3.76e-01 | 81.9% | 69.2% |
| 3763936 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.54 | 38.0 | 3.44e-01 | 73.3% | 62.5% |
| 3777334 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.54 | 38.0 | 3.43e-01 | 73.3% | 61.0% |
| 3868838 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.54 | 38.0 | 3.43e-01 | 73.3% | 61.9% |
| 5037589 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 39.0 | 2.72e-01 | 76.7% | 93.4% |
| 3705153 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 37.0 | 3.53e-01 | 91.4% | 63.0% |
| 3564821 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.52 | 36.0 | 3.34e-01 | 73.3% | 64.5% |
| 3950100 | 223.3.1.0 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins | 0.51 | 44.0 | 3.98e-01 | 94.8% | 95.6% |
| 4625649 | 223.3.1.6 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S13 | 0.51 | 43.0 | 3.79e-01 | 94.8% | 83.7% |
| 3283383 | 223.3.1.6 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S13 | 0.50 | 44.0 | 3.89e-01 | 98.3% | 94.8% |
| 4463774 | 223.3.1.8 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 | 0.50 | 45.0 | 3.93e-01 | 99.1% | 82.3% |