RING_and_ubiquitin_domain_protein

Euk-Vir

Pandoravirus_inopinatum

RING_and_ubiquitin_domain_protein__YP_009119643__Pandoravirus_inopinatum__1605721

Identity

73.0 mean pLDDT

Singleton — not in a non-trivial cluster

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 58-120

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1buiA01	2.40.10.10	Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases	0.60	41.0	3.36e-01	73.0%	88.9%
1vwxB02	2.40.30.10	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors	0.55	41.0	3.06e-01	84.1%	86.1%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4932513	1.1.7.2 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L3	0.55	39.0	2.55e-01	77.8%	50.8%
3935272	209.1.1.1 ↗	a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C	0.51	36.0	2.88e-01	93.7%	36.2%
3505289	2004.1.1.19 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras	0.51	35.0	2.56e-01	74.6%	88.3%
3787437	1.1.7.2 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L3	0.50	40.0	2.61e-01	98.4%	83.8%
3475535	1.1.7.2 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L3	0.50	40.0	2.56e-01	98.4%	84.6%