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RING_finger_protein

Euk-Vir

Phaeocystis_globosa_virus

RING_finger_protein__YP_008052568__Phaeocystis_globosa_virus__251749

Identity

Accession:
YP_008052568 ↗
Protein ID:
RING_finger_protein
Kingdom:
euk

Quality

60.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-71
PDB
D2 high residues 117-194
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13639.13 best zf-RING_2 32.9 8.60e-08 57.7% 95.5%
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7r71A01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.88 70.0 7.76e-01 87.2% 100.0%
4v3lC00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.88 73.0 7.73e-01 88.5% 97.1%
4wz0A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.79 54.0 4.76e-01 70.5% 62.4%
2l0bA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.79 70.0 6.60e-01 96.2% 82.4%
4b6dB00 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.76 49.0 5.58e-01 84.6% 89.5%
2lxhC00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.76 54.0 6.12e-01 83.3% 100.0%
1z6uA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.74 55.0 4.76e-01 76.9% 69.6%
1v87A01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.73 63.0 6.10e-01 92.3% 100.0%
1e53A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.73 52.0 5.76e-01 87.2% 98.3%
1y8fA00 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.72 46.0 5.42e-01 84.6% 100.0%
1xa6A02 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.72 47.0 5.00e-01 84.6% 76.8%
5vmzA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.68 35.0 4.72e-01 87.2% 100.0%
1v9xA00 3.30.1740.10 Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type 0.68 50.0 4.34e-01 76.9% 88.6%
2kkxA00 3.30.40.80 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Effector protein NleG 0.68 58.0 5.30e-01 94.9% 78.4%
2yuuA00 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.67 50.0 4.92e-01 93.6% 74.7%
1r79A01 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.65 43.0 4.88e-01 84.6% 98.2%
1tbnA00 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.65 45.0 4.84e-01 89.7% 86.4%
1z2qA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.63 38.0 3.79e-01 71.8% 56.0%
2rowA01 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.63 47.0 4.95e-01 84.6% 88.7%
2mdiA00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.61 32.0 3.67e-01 71.8% 69.6%
2fd4A00 3.30.40.110 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › AvrPtoB, C-terminal domain 0.59 52.0 4.72e-01 98.7% 87.6%
3vxvA00 3.30.890.10 Alpha Beta › 2-Layer Sandwich › Methyl-cpg-binding Protein 2; Chain A › Methyl-cpg-binding Protein 2; Chain A 0.54 36.0 3.91e-01 92.3% 83.1%
2fnoA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 38.0 3.65e-01 83.3% 64.9%
1y2mD01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.51 41.0 3.13e-01 93.6% 66.4%
2q5iA03 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.51 41.0 3.60e-01 89.7% 92.6%
ECOD (86)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3805691 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.94 81.0 7.00e-01 92.3% 63.6%
3465532 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.93 67.0 7.11e-01 74.4% 100.0%
3332568 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.91 73.0 6.87e-01 92.3% 72.2%
3382057 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.90 75.0 7.30e-01 87.2% 91.8%
3665380 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.90 79.0 7.86e-01 92.3% 100.0%
3804164 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.89 76.0 6.76e-01 93.6% 66.7%
5049855 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.88 60.0 6.88e-01 70.5% 95.0%
3346269 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.87 78.0 7.35e-01 100.0% 81.1%
3366410 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.87 82.0 7.05e-01 100.0% 71.3%
3346431 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.87 79.0 8.10e-01 94.9% 100.0%
3818416 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.87 60.0 5.95e-01 70.5% 70.0%
3343538 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.87 75.0 7.70e-01 93.6% 94.7%
3486377 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.87 76.0 7.77e-01 94.9% 96.0%
3664051 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.86 74.0 6.83e-01 89.7% 73.7%
3688776 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.86 67.0 6.71e-01 82.1% 91.3%
3268433 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.86 72.0 7.16e-01 87.2% 95.0%
3306931 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.86 81.0 6.84e-01 100.0% 65.8%
3375836 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.86 77.0 7.01e-01 94.9% 75.0%
3315604 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.86 68.0 7.49e-01 88.5% 100.0%
3887522 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.86 77.0 7.49e-01 94.9% 88.2%
3366699 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.85 76.0 7.39e-01 93.6% 96.5%
3528982 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.85 76.0 7.53e-01 93.6% 98.8%
3436301 376.1.2.12 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › zf-RING_2 0.85 73.0 7.27e-01 89.7% 100.0%
3433991 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.85 76.0 6.40e-01 93.6% 60.8%
3432480 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.85 74.0 7.60e-01 92.3% 100.0%
3824369 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.85 76.0 6.55e-01 94.9% 64.3%
3608477 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.85 73.0 7.44e-01 96.2% 94.7%
3814655 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.85 76.0 7.59e-01 96.2% 98.8%
3365516 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.85 75.0 7.27e-01 93.6% 89.4%
3265424 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.84 73.0 7.52e-01 93.6% 96.0%
3664044 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.84 77.0 6.81e-01 96.2% 76.2%
3721167 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.84 69.0 5.71e-01 87.2% 89.2%
3347446 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.84 75.0 6.69e-01 94.9% 73.3%
3592076 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.84 70.0 7.41e-01 92.3% 100.0%
3808262 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.83 74.0 6.64e-01 94.9% 71.4%
5073369 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.83 57.0 6.23e-01 73.1% 84.6%
4944275 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.83 63.0 6.67e-01 83.3% 88.6%
4028171 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.83 75.0 7.63e-01 94.9% 100.0%
3683843 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.83 72.0 6.83e-01 92.3% 80.0%
3684499 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.83 70.0 6.60e-01 88.5% 100.0%
4999356 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.83 59.0 6.20e-01 73.1% 98.6%
3819080 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.83 74.0 7.62e-01 98.7% 98.7%
3909802 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.82 77.0 7.01e-01 100.0% 85.0%
3414941 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.82 77.0 7.53e-01 100.0% 97.6%
3464516 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.82 75.0 7.31e-01 97.4% 100.0%
3818567 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.82 76.0 7.23e-01 98.7% 100.0%
3677216 376.1.1.40 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_11 0.82 58.0 6.59e-01 76.9% 96.7%
3542887 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.82 74.0 7.48e-01 98.7% 97.4%
3384844 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.82 74.0 7.55e-01 98.7% 100.0%
4977742 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.81 58.0 5.68e-01 74.4% 83.5%
4946824 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 58.0 4.07e-01 74.4% 31.8%
3295801 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.81 70.0 6.63e-01 94.9% 78.9%
3353437 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.81 67.0 7.10e-01 89.7% 97.1%
3421839 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.81 72.0 6.85e-01 94.9% 97.8%
3371109 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.80 72.0 6.02e-01 94.9% 60.8%
4997635 376.1.1.182 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Zn_ribbon_3 0.80 57.0 5.68e-01 73.1% 87.5%
3267159 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.80 75.0 6.80e-01 100.0% 80.0%
4934214 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.80 60.0 6.55e-01 87.2% 96.8%
3295435 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.80 73.0 7.49e-01 97.4% 100.0%
3677066 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.80 71.0 7.05e-01 94.9% 100.0%
3307860 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.80 73.0 7.24e-01 96.2% 96.2%
3425799 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.79 72.0 7.40e-01 94.9% 100.0%
3776916 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.79 72.0 6.97e-01 96.2% 88.2%
3460948 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.79 74.0 6.97e-01 98.7% 100.0%
4975593 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.79 57.0 5.51e-01 74.4% 82.4%
4976747 109.4.1.5 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 0.79 58.0 3.82e-01 76.9% 57.6%
3669336 376.1.2.12 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › zf-RING_2 0.79 73.0 7.05e-01 98.7% 92.9%
3399001 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.78 68.0 6.78e-01 92.3% 100.0%
3608692 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.78 72.0 7.10e-01 100.0% 97.6%
3180663 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.78 67.0 6.86e-01 92.3% 100.0%
4012099 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.77 69.0 6.88e-01 96.2% 96.2%
5052405 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.77 60.0 5.72e-01 83.3% 71.9%
3655538 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.77 71.0 6.90e-01 98.7% 92.9%
3459348 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.77 70.0 6.51e-01 97.4% 83.2%
5071881 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.77 51.0 5.64e-01 73.1% 88.3%
3413229 376.1.2.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.77 48.0 5.79e-01 76.9% 100.0%
3306155 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.76 71.0 6.99e-01 100.0% 94.0%
3684414 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.76 70.0 6.99e-01 97.4% 100.0%
4945028 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.74 60.0 6.22e-01 87.2% 93.2%
4014164 376.1.2.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.74 49.0 5.35e-01 79.5% 83.1%
3827296 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.70 66.0 5.79e-01 100.0% 98.2%
3812458 376.1.2.2 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.63 44.0 3.44e-01 73.1% 36.5%
3832280 377.1.1.86 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › C1_2 0.63 44.0 4.58e-01 71.8% 87.1%
3826536 376.1.2.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.62 41.0 4.70e-01 73.1% 96.4%
3817565 376.1.2.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.61 39.0 4.54e-01 70.5% 100.0%
3803107 376.1.2.37 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2, C1-like_CT 0.60 45.0 3.21e-01 82.1% 70.4%