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RNA-dependent_RNA_polymerase_NS5B

Euk-Vir

Hepacivirus_K

RNA-dependent_RNA_polymerase_NS5B__YP_009664182__Hepacivirus_K__2008770

Identity

Accession:
YP_009664182 ↗
Protein ID:
RNA-dependent_RNA_polymerase_NS5B
Kingdom:
euk

Quality

87.0 mean pLDDT

Taxonomy

Orthornavirae› Kitrinoviricota› Flasuviricetes› Amarillovirales› Flaviviridae› Hepacivirus› Hepacivirus_macronycteridis

TaxID: 2008770

Cluster

View cluster (450 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 367-560
PDB
Domain cluster: rep: NS5B_RNA-dependent_RNA_polymerase__YP_009272656__Hepatitis_C_virus_genotype_5__33746__D391-472_498-585
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00998.29 best RdRP_3 62.5 4.50e-17 75.8% 27.8%
D2 medium residues 1-60
PDB
Domain cluster: rep: NS5B_RNA-dependent_RNA_polymerase__YP_009272689__Hepatitis_C_virus_genotype_7__1544901__D1-52
D3 medium residues 61-182_223-287
PDB
Domain cluster: rep: hypothetical_protein_3__YP_009345007__Wuhan_spider_virus_8__1923757__D1-105_147-200
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00998.29 best RdRP_3 38.6 8.30e-10 63.6% 21.4%
PF00998.29 RdRP_3 51.5 9.70e-14 35.8% 13.2%
D4 medium residues 183-222_288-366
PDB
Domain cluster: rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00998.29 best RdRP_3 46.9 2.60e-12 68.1% 15.6%