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RNA-dependent_RNA_polymerase_NS5B

Euk-Vir

Hepacivirus_B

RNA-dependent_RNA_polymerase_NS5B__YP_009678993__Hepacivirus_B__2008762

Identity

Accession:
YP_009678993 ↗
Protein ID:
RNA-dependent_RNA_polymerase_NS5B
Kingdom:
euk

Quality

90.5 mean pLDDT

Taxonomy

Orthornavirae› Kitrinoviricota› Flasuviricetes› Amarillovirales› Flaviviridae› Hepacivirus› Hepacivirus_platyrrhini

TaxID: 2008762

Cluster

View cluster (450 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 366-541
PDB
Domain cluster: rep: NS5B_RNA-dependent_RNA_polymerase__YP_009272656__Hepatitis_C_virus_genotype_5__33746__D391-472_498-585
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00998.29 best RdRP_3 82.0 5.80e-23 83.0% 27.2%
D2 medium residues 1-59_142-159
PDB
Domain cluster: rep: nonstructural_protein_NS5B__YP_009325401__Norway_rat_hepacivirus_1__1562038__D18-60_139-160
D3 medium residues 60-141_160-187_221-275
PDB
Domain cluster: rep: hypothetical_protein_3__YP_009345007__Wuhan_spider_virus_8__1923757__D1-105_147-200
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00998.29 best RdRP_3 42.7 4.50e-11 37.0% 11.7%
D4 medium residues 188-220_276-365
PDB
Domain cluster: rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00998.29 best RdRP_3 106.6 1.90e-30 74.8% 17.5%