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RNA-dependent_RNA_polymerase_NS5B

Euk-Vir

Hepacivirus_N

RNA-dependent_RNA_polymerase_NS5B__YP_009679013__Hepacivirus_N__2008773

Identity

Accession:
YP_009679013 ↗
Protein ID:
RNA-dependent_RNA_polymerase_NS5B
Kingdom:
euk

Quality

88.4 mean pLDDT

Taxonomy

Orthornavirae› Kitrinoviricota› Flasuviricetes› Amarillovirales› Flaviviridae› Hepacivirus› Hepacivirus_bovis

TaxID: 2008773

Cluster

View cluster (450 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 372-554
PDB
Domain cluster: rep: NS5B_RNA-dependent_RNA_polymerase__YP_009272656__Hepatitis_C_virus_genotype_5__33746__D391-472_498-585
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00998.29 best RdRP_3 38.3 1.00e-09 74.3% 24.3%
D2 medium residues 1-52_141-161
PDB
Domain cluster: rep: putative_NS5B_RNA-dependent_RNA_polymerase__NP_803209__GB_virus_C__54290__D11-58_139-152
D3 medium residues 53-140_162-187_220-277
PDB
Domain cluster: rep: hypothetical_protein_3__YP_009345007__Wuhan_spider_virus_8__1923757__D1-105_147-200
D4 medium residues 188-219_278-371
PDB
Domain cluster: rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00998.29 best RdRP_3 73.5 2.10e-20 75.4% 17.5%