RNA-dependent_RNA_polymerase

Euk-Vir

Discula_destructiva_virus_1

RNA-dependent_RNA_polymerase__NP_116716__Discula_destructiva_virus_1__148880

Identity

79.0 mean pLDDT

Orthornavirae› Pisuviricota› Duplopiviricetes› Durnavirales› Partitiviridae› Gammapartitivirus› Discula_destructiva_virus_1

TaxID: 148880

View cluster (450 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 438-535

PDB

Domain cluster: rep: 62_kDa_protein__YP_009182336__Penicillium_aurantiogriseum_partitivirus_1__1756157__D437-535

D2 medium residues 50-66_89-114_145-254_337-347

PDB

Domain cluster: rep: RNA-dependent_RNA_polymerase__YP_656506__Raphanus_sativus_cryptic_virus_1__348449__D107-229_290-339

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00680.26 best	RdRP_1	68.9	5.30e-19	74.4%	23.6%

D3 medium residues 115-144_283-336_348-359

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00680.26 best	RdRP_1	29.3	5.40e-07	69.8%	14.2%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1s0pA01	1.25.40.330	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Adenylate cyclase-associated CAP, N-terminal domain	0.53	37.0	3.13e-01	72.9%	53.2%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3996299	109.5.1.1 ↗	alpha superhelices › Repetitive alpha hairpins › adenylylcyclase associated protein, CAP-N › adenylylcyclase associated protein, CAP-N › CAP_N	0.56	39.0	3.56e-01	72.9%	67.4%

D4 medium residues 360-434

PDB

Domain cluster: rep: ORF2__YP_004581250__Piscine_myocarditis_virus_AL_V-708__912320__D347-428

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00680.26 best	RdRP_1	38.7	7.40e-10	100.0%	19.8%