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RNA-dependent_RNA_polymerase

Euk-Vir

Ceratocystis_resinifera_virus_1

RNA-dependent_RNA_polymerase__YP_001936016__Ceratocystis_resinifera_virus_1__674982

Identity

Accession:
YP_001936016 ↗
Protein ID:
RNA-dependent_RNA_polymerase
Kingdom:
euk

Quality

75.7 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Duplopiviricetes› Durnavirales› Partitiviridae› Betapartitivirus› Ceratocystis_resinifera_virus_1

TaxID: 674982

Cluster

View cluster (450 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 44-87_418-443
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2cxiA03 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.51 28.0 2.84e-01 74.3% 50.0%
D2 medium residues 88-131_540-663
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1xeqB00 1.10.287.10 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding 0.55 27.0 3.74e-01 70.8% 92.9%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3515234 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.51 35.0 3.80e-01 86.3% 82.1%
D3 medium residues 132-174_299-342_444-539
PDB
Domain cluster: rep: RdRp__YP_009329892__Hubei_diptera_virus_18__1922879__D212-248_314-400_504-519