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RNA-dependent_RNA_polymerase
Euk-VirGrapevine_Syrah_virus_1
RNA-dependent_RNA_polymerase__YP_002775440__Grapevine_Syrah_virus_1__630199
Identity
- Accession:
- YP_002775440 ↗
- Protein ID:
- RNA-dependent_RNA_polymerase
- Kingdom:
- euk
Quality
81.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 446-564
D2
medium
residues 1-75
D3
medium
residues 107-152_188-308
Domain cluster:
rep: RdRp__YP_006908997__Diuris_virus_A__1247115__D19-40_76-171
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5018572 | 304.48.1.72 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_N | 0.66 | 47.0 | 4.60e-01 | 72.5% | 75.0% |
| 4071235 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.65 | 47.0 | 3.26e-01 | 72.5% | 53.5% |
| 5029718 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.61 | 43.0 | 3.41e-01 | 71.9% | 65.6% |
| 3768112 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.61 | 44.0 | 4.12e-01 | 72.5% | 72.0% |
| 3250871 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.60 | 42.0 | 4.46e-01 | 71.9% | 90.0% |
D4
medium
residues 153-187_373-430
Domain cluster:
representative