RNA-dependent_RNA_polymerase

Euk-Vir

Thin_paspalum_asymptomatic_virus

RNA-dependent_RNA_polymerase__YP_008219057__Thin_paspalum_asymptomatic_virus__1352511

Identity

76.9 mean pLDDT

View cluster (58 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-84

PDB

D2 high residues 195-317

PDB

Domain cluster: rep: replicase__YP_009037607__Moroccan_pepper_virus__208086__D159-283

D3 high residues 324-368

PDB

D4 high residues 757-909

PDB

Domain cluster: rep: P95_replicase__YP_009259667__Pelargonium_leaf_curl_virus__35280__D527-559_693-852

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	142.7	2.10e-41	88.9%	28.4%

D5 medium residues 108-133_165-194

PDB

D6 medium residues 382-477

PDB

Domain cluster: rep: hypothetical_protein_1__YP_009337417__Changjiang_tombus-like_virus_9__1922823__D348-350_352-432_502-513

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	41.1	1.40e-10	79.2%	13.4%

D7 medium residues 478-588_639-681

PDB

Domain cluster: rep: hypothetical_protein_3__YP_009345007__Wuhan_spider_virus_8__1923757__D1-105_147-200

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	139.6	1.90e-40	73.4%	22.8%
PF00998.29	RdRP_3	46.4	3.40e-12	28.6%	8.6%

D8 medium residues 589-638_682-756

PDB

Domain cluster: rep: hypothetical_protein_1__YP_009337274__Changjiang_tombus-like_virus_14__1922807__D158-196_253-344

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	87.8	9.90e-25	60.8%	15.4%
PF00998.29	RdRP_3	79.7	2.80e-22	41.6%	10.5%