RNA-dependent_RNA_polymerase

Euk-Vir

Dill_cryptic_virus_1

RNA-dependent_RNA_polymerase__YP_008719880__Dill_cryptic_virus_1__1408895

Identity

79.5 mean pLDDT

Orthornavirae› Pisuviricota› Duplopiviricetes› Durnavirales› Partitiviridae› Dill_cryptic_virus_1

TaxID: 1408895

View cluster (450 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 21-36_76-86_130-149_188-261_381-392

PDB

Domain cluster: rep: RNA-dependent_RNA_polymerase__YP_009508236__Chondrostereum_purpureum_cryptic_virus_1__529380__D131-231

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3001810	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.55	19.0	3.17e-01	77.4%	95.2%
5032176	1.1.3.2 ↗	beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin	0.53	20.0	2.98e-01	78.9%	76.7%
5035417	3010.1.1.0 ↗	a/b three-layered sandwiches › C-terminal subdomain in Lon-related proteases catalytic domains › C-terminal subdomain in Lon-related proteases catalytic domains › C-terminal subdomain in Lon-related proteases catalytic domains	0.53	27.0	3.16e-01	86.5%	67.4%

D2 medium residues 37-75_277-294_487-616

PDB

Domain cluster: rep: RNA-dependent_RNA_polymerase__YP_656506__Raphanus_sativus_cryptic_virus_1__348449__D32-57_444-535

D3 medium residues 87-107_295-323_393-486

PDB

Domain cluster: rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00680.26 best	RdRP_1	27.3	2.10e-06	96.5%	26.0%

D4 medium residues 108-129_262-276_324-380

PDB

Domain cluster: rep: RNA-dependent_RNA_polymerase__YP_009011230__Rhizoctonia_solani_dsRNA_virus_2__1411681__D119-130_237-282_348-381