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RNA-dependent_RNA_polymerase

Euk-Vir

Astrovirus_Er_SZAL6_HUN_2011

RNA-dependent_RNA_polymerase__YP_009154706__Astrovirus_Er_SZAL6_HUN_2011__1671382

Identity

Accession:
YP_009154706 ↗
Protein ID:
RNA-dependent_RNA_polymerase
Kingdom:
euk

Quality

91.9 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Stelpaviricetes› Stellavirales› Astroviridae› Astrovirus_Er/SZAL6/HUN/2011

TaxID: 1671382

Cluster

View cluster (450 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 401-478
PDB
Domain cluster: rep: ORF1b,_partial__YP_005271208__Astrovirus_wild_boar_WBAstV-1_2011_HUN__1137931__D442-513
D2 medium residues 67-101_205-246_305-391
PDB
Domain cluster: rep: RNA-dependent_RNA_polymerase__YP_009333212__Beihai_astro-like_virus__1922353__D104-144_202-314
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 32.4 6.20e-08 53.0% 20.4%
PF00680.26 RdRP_1 28.5 9.20e-07 42.7% 8.9%
D3 medium residues 102-204_247-304
PDB
Domain cluster: rep: RNA-dependent_RNA_polymerase__YP_009336808__Changjiang_astro-like_virus__1922764__D115-160_194-216_235-262_293-352