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RNA-dependent_RNA_polymerase

Euk-Vir

Lutzomyia_reovirus_1

RNA-dependent_RNA_polymerase__YP_009158917__Lutzomyia_reovirus_1__1670669

Identity

Accession:: YP_009158917 ↗
Protein ID:: RNA-dependent_RNA_polymerase
Kingdom:: euk

Quality

78.1 mean pLDDT

Cluster

View cluster (29 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 23-269_297-353_757-788

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF22209.2 best	CPV_RdRP_N	254.4	1.50e-75	59.2%	77.4%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1697856	4963.1.1.3 ↗	alpha complex topology › N-terminal additional helical subdomain in reovirus polymerase lambda3 › N-terminal additional helical subdomain in reovirus polymerase lambda3 › N-terminal additional helical subdomain in reovirus polymerase lambda3 › CPV_RdRP_N	0.92	82.0	8.19e-01	90.5%	92.7%
4905	4963.1.1.2 ↗	alpha complex topology › N-terminal additional helical subdomain in reovirus polymerase lambda3 › N-terminal additional helical subdomain in reovirus polymerase lambda3 › N-terminal additional helical subdomain in reovirus polymerase lambda3 › RdRP_5	0.77	68.0	6.51e-01	90.5%	92.6%
2392232	4963.1.1.2 ↗	alpha complex topology › N-terminal additional helical subdomain in reovirus polymerase lambda3 › N-terminal additional helical subdomain in reovirus polymerase lambda3 › N-terminal additional helical subdomain in reovirus polymerase lambda3 › RdRP_5	0.75	66.0	6.30e-01	90.5%	97.4%

D2 high residues 941-1004

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF22213.2 best	CPV_RdRP_C	69.9	3.20e-19	100.0%	18.7%

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3ufeA02	1.20.58.1950	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.65	42.0	4.58e-01	71.9%	81.1%
1td6A03	1.10.472.40	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Hypothetical protein mg237 homolog; domain 3	0.61	42.0	3.74e-01	90.6%	50.0%
2ovjA00	1.10.555.10	Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein	0.58	44.0	3.21e-01	85.9%	39.8%
2ktmA00	1.10.790.10	Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain	0.53	41.0	4.06e-01	93.8%	80.9%
3qcmA00	3.90.190.10	Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily	0.52	40.0	2.65e-01	84.4%	90.6%
2lrmA00	1.10.890.30	Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › YmgD protein	0.51	36.0	3.35e-01	98.4%	57.1%
16vpA00	1.10.1290.10	Mainly Alpha › Orthogonal Bundle › Conserved core of transcriptional regulatory protein vp16 › Alpha trans-inducing (Alpha-TIF)	0.50	41.0	2.74e-01	98.4%	78.1%
3l8kA01	3.50.50.60	Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain	0.50	43.0	3.04e-01	100.0%	29.5%

ECOD (16)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3222309	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.67	44.0	4.58e-01	95.3%	73.3%
3735853	101.7.1.1 ↗	alpha arrays › HTH › DEK-C › DEK-C › DEK_C	0.66	42.0	4.31e-01	98.4%	68.3%
3507881	101.7.1.1 ↗	alpha arrays › HTH › DEK-C › DEK-C › DEK_C	0.66	40.0	4.19e-01	92.2%	69.1%
5042877	103.5.1.0 ↗	alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like	0.64	42.0	4.69e-01	71.9%	88.0%
3631692	101.1.1.176 ↗	alpha arrays › HTH › HTH › Three-helical HTH › DEK_C	0.63	39.0	4.00e-01	89.1%	65.0%
3958049	633.6.1.0 ↗	alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like	0.61	46.0	3.77e-01	81.2%	90.0%
3924903	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.61	37.0	3.73e-01	87.5%	58.5%
4513921	101.7.1.1 ↗	alpha arrays › HTH › DEK-C › DEK-C › DEK_C	0.59	37.0	3.82e-01	93.8%	65.0%
4438754	101.7.1.1 ↗	alpha arrays › HTH › DEK-C › DEK-C › DEK_C	0.59	35.0	3.70e-01	96.9%	67.3%
3876674	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.59	40.0	3.67e-01	100.0%	51.1%
3961597	7579.1.1.62 ↗	a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_8	0.54	44.0	2.81e-01	93.8%	68.5%
3943210	5079.1.1.1 ↗	alpha duplicates or obligate multimers › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › Magnesium transporter MgtE membrane domain › MgtE	0.53	46.0	3.34e-01	100.0%	73.2%
4555675	101.1.1.27 ↗	alpha arrays › HTH › HTH › Three-helical HTH › DsrC	0.53	40.0	3.39e-01	79.7%	73.4%
3988076	3646.1.1.0 ↗	alpha complex topology › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters	0.53	41.0	2.94e-01	87.5%	85.7%
3599924	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.51	42.0	4.36e-01	90.6%	98.3%
3873688	206.1.1.7 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase	0.51	41.0	2.59e-01	92.2%	17.4%

D3 medium residues 364-382_578-611

PDB

Domain cluster: representative

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5wnoA01	3.30.200.20	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1	0.57	40.0	3.44e-01	79.2%	44.9%
3d03A01	3.60.21.40	Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › GpdQ, catalytic alpha/beta sandwich domain	0.55	39.0	2.99e-01	77.4%	98.5%
1jpyX00	2.10.90.10	Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines	0.52	38.0	3.04e-01	81.1%	52.1%
3mjkA00	2.10.90.10	Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines	0.52	37.0	2.88e-01	77.4%	42.6%
6vg1A01	2.60.40.60	Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins	0.52	37.0	3.17e-01	77.4%	66.7%
2hoxA03	3.90.1150.10	Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1	0.51	38.0	3.05e-01	81.1%	62.8%
6krwA01	3.90.190.10	Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily	0.51	39.0	2.45e-01	81.1%	15.2%
1wnhA01	3.10.450.10	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.51	36.0	3.03e-01	77.4%	43.0%
1g44C04	2.10.70.10	Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1	0.51	33.0	3.56e-01	75.5%	81.0%
1v1qA00	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.50	35.0	2.83e-01	75.5%	42.7%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3695032	1.1.1.1 ↗	beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp	0.61	47.0	2.83e-01	84.9%	30.9%
3350809	77.1.1.5 ↗	beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN	0.58	43.0	3.64e-01	83.0%	64.2%
3935073	389.1.2.0 ↗	few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain	0.55	40.0	3.89e-01	81.1%	76.7%
3186240	206.1.1.0 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase	0.54	38.0	2.34e-01	77.4%	12.8%
4014922	4.8.1.0 ↗	beta barrels › SH3 › Chromo domain-like › Chromo domain-like	0.54	38.0	3.47e-01	77.4%	77.3%
4969589	1.1.1.0 ↗	beta barrels › cradle loop barrel › RIFT-related › acid protease	0.53	38.0	3.34e-01	79.2%	92.9%
3735810	206.1.1.1 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase	0.52	39.0	2.37e-01	81.1%	17.0%

D4 medium residues 793-852_1012-1031

PDB

Domain cluster: representative

CATH (26)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3d2lC01	3.40.50.150	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39	0.59	42.0	3.22e-01	73.8%	82.0%
7q6gA01	3.30.1490.110	Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 ›	0.59	42.0	4.28e-01	73.8%	94.8%
3b34A01	2.60.40.1730	Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain	0.59	47.0	3.73e-01	90.0%	88.9%
2bkoA02	3.30.70.1450	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain	0.57	46.0	4.60e-01	87.5%	100.0%
6gmhC01	3.30.1360.10	Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit	0.55	46.0	3.88e-01	93.8%	79.1%
4mmoA02	3.30.70.360	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.55	44.0	3.51e-01	88.7%	91.0%
2pokA02	3.30.70.360	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.55	45.0	3.56e-01	91.3%	90.6%
1dj0A02	3.30.70.580	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, N-terminal subdomain	0.54	45.0	4.14e-01	92.5%	78.5%
4lfhD02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.54	37.0	3.73e-01	72.5%	90.6%
2qsvA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.54	36.0	3.37e-01	70.0%	84.3%
1e5rB01	2.60.120.330	Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain	0.53	38.0	3.02e-01	75.0%	50.3%
2osxA01	2.60.40.1180	Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II	0.53	34.0	3.19e-01	91.3%	51.5%
1k1gA00	3.30.1370.10	Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1	0.53	45.0	3.92e-01	93.8%	92.6%
5brqA03	2.60.40.1180	Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II	0.53	36.0	3.67e-01	72.5%	76.5%
5gxxA02	2.60.40.710	Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like	0.53	42.0	3.50e-01	91.3%	73.2%
3cedA00	3.30.70.260	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain	0.53	43.0	4.01e-01	91.3%	72.4%
6ifsB01	3.40.50.150	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39	0.52	36.0	2.75e-01	71.2%	83.4%
3c0tA00	2.40.320.10	Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001	0.52	43.0	3.24e-01	91.3%	95.5%
1y8cA01	3.40.50.150	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39	0.52	36.0	2.84e-01	73.8%	81.2%
5x8tT00	3.90.470.10	Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17	0.52	37.0	3.06e-01	75.0%	79.2%
3d3sA00	3.40.630.30	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT)	0.52	36.0	2.91e-01	73.8%	57.9%
2qndA02	3.30.1370.10	Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1	0.51	43.0	4.38e-01	92.5%	97.5%
2qswA00	3.30.70.260	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain	0.51	41.0	4.01e-01	91.3%	78.9%
1nrkA01	3.30.70.1630	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.51	42.0	3.97e-01	92.5%	96.9%
2yocB01	2.60.40.1110	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.51	36.0	3.12e-01	75.0%	79.5%
1vwxP00	3.90.470.10	Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17	0.51	36.0	2.92e-01	75.0%	92.8%

ECOD (31)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5021910	11.1.1.410 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › BatD	0.61	50.0	4.55e-01	88.7%	88.6%
5064686	4178.1.1.1 ↗	beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › DUF5110	0.61	41.0	3.54e-01	70.0%	56.6%
3964535	310.3.1.1 ↗	a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PilO	0.60	43.0	3.79e-01	75.0%	62.6%
5005659	11.1.5.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f	0.60	41.0	3.58e-01	71.2%	73.6%
3405003	2003.1.5.46 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS	0.59	41.0	2.99e-01	72.5%	79.0%
4662593	304.8.1.5 ↗	a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL	0.58	48.0	4.50e-01	87.5%	75.8%
3570615	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.57	39.0	3.64e-01	70.0%	84.0%
4104982	11.1.5.19 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adhesin_Dr	0.57	47.0	4.11e-01	92.5%	80.0%
4969298	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.57	47.0	4.16e-01	90.0%	84.3%
3170803	12.1.1.44 ↗	beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_5_C	0.57	38.0	3.68e-01	70.0%	75.8%
None	—		0.57	40.0	2.80e-01	75.0%	77.4%
4944626	304.25.1.1 ↗	a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer	0.56	44.0	3.42e-01	86.3%	92.4%
4213722	4261.1.1.0 ↗	a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like	0.56	44.0	4.28e-01	86.3%	81.1%
3289729	12.1.1.34 ↗	beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro38C2	0.56	39.0	3.66e-01	75.0%	68.6%
5038763	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.55	37.0	3.64e-01	70.0%	88.9%
4058358	327.11.2.26 ↗	a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_N4BP1_1st	0.55	45.0	4.56e-01	87.5%	98.8%
4251672	101.1.9.5 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › B5	0.55	47.0	4.28e-01	92.5%	85.7%
3668582	304.25.1.1 ↗	a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer	0.55	45.0	3.96e-01	90.0%	90.0%
5003447	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.54	37.0	3.52e-01	71.2%	91.0%
4020202	2003.1.5.73 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16	0.54	38.0	2.52e-01	73.8%	27.6%
4960751	4261.1.1.1 ↗	a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C	0.54	44.0	4.52e-01	88.7%	97.3%
4364438	304.8.1.5 ↗	a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL	0.54	42.0	4.06e-01	86.3%	80.9%
4931735	206.1.3.2 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GARS_A	0.54	42.0	2.77e-01	86.3%	58.9%
3605887	304.116.1.1 ↗	a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in release factor › Ferredoxin-like domain in release factor › PCRF	0.53	42.0	3.67e-01	86.3%	65.6%
3255210	884.1.1.0 ↗	a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain	0.53	42.0	3.73e-01	91.3%	83.1%
3623132	304.20.1.2 ↗	a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › Nrap_D3	0.53	43.0	3.43e-01	91.3%	91.2%
3721393	304.4.1.0 ↗	a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel	0.52	42.0	3.67e-01	90.0%	81.6%
1125238	304.109.1.1 ↗	a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23	0.52	37.0	3.62e-01	75.0%	75.9%
3489193	101.1.9.5 ↗	alpha arrays › HTH › HTH › Putative DNA-binding domain › B5	0.51	43.0	4.00e-01	93.8%	84.8%
3516395	11.1.1.13 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Motile_Sperm	0.51	37.0	3.21e-01	78.8%	88.5%
4133168	304.44.1.2 ↗	a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › PriA_C	0.50	42.0	3.90e-01	93.8%	78.1%

D5 medium residues 853-932

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF22213.2 best	CPV_RdRP_C	48.0	1.50e-12	63.7%	14.0%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4946969	4076.3.1.0 ↗	a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain	0.62	34.0	4.03e-01	90.0%	84.0%
3407377	4076.3.1.9 ↗	a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › PSF1_C	0.62	34.0	3.81e-01	92.5%	71.2%
4935547	4076.3.1.0 ↗	a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain	0.61	33.0	3.91e-01	92.5%	82.0%
3929096	4076.3.1.0 ↗	a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain	0.60	34.0	3.99e-01	91.3%	86.0%
4932084	4076.3.1.0 ↗	a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain	0.60	33.0	3.82e-01	90.0%	82.0%
4956746	4076.3.1.5 ↗	a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › Gins51_C	0.59	33.0	3.86e-01	92.5%	84.0%
4056586	304.28.1.0 ↗	a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain	0.56	31.0	2.49e-01	86.3%	23.8%
5037502	4076.3.1.5 ↗	a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › Gins51_C	0.53	32.0	3.58e-01	93.8%	87.0%
4226938	331.10.1.2 ↗	a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › AdoMet_dc	0.51	42.0	3.15e-01	95.0%	80.9%

D6 medium residues 1032-1081_1160-1223

PDB