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RNA-dependent_RNA_polymerase
Euk-VirPhasey_bean_mild_yellows_virus
RNA-dependent_RNA_polymerase__YP_009198211__Phasey_bean_mild_yellows_virus__1756832
Identity
- Accession:
- YP_009198211 ↗
- Protein ID:
- RNA-dependent_RNA_polymerase
- Kingdom:
- euk
Quality
74.0
mean pLDDT
Cluster
View cluster (38 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 215-234_319-353_373-435
Domain cluster:
rep: P1-P2_fusion_protein__YP_009254738__Pepo_aphid-borne_yellows_virus__1462681__D328-414
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02122.22 best | Peptidase_S39 | 86.1 | 3.40e-24 | 84.8% | 46.8% |
D2
medium
residues 235-318
Domain cluster:
rep: hypothetical_protein__YP_009825042__Birds-foot_trefoil_enamovirus_1__2283314__D329-413
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02122.22 best | Peptidase_S39 | 96.6 | 2.10e-27 | 100.0% | 39.4% |
D3
medium
residues 628-652_654-665_805-836_911-943_945-964
Domain cluster:
rep: hypothetical_protein_3__YP_009345007__Wuhan_spider_virus_8__1923757__D1-105_147-200
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02123.22 best | RdRP_4 | 27.0 | 3.10e-06 | 44.3% | 9.2% |
D4
medium
residues 696-804_837-857
Domain cluster:
rep: hypothetical_protein_2__YP_009337098__Changjiang_polero-like_virus_1__1922799__D1-82_112-138
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02123.22 best | RdRP_4 | 24.7 | 1.50e-05 | 85.4% | 24.7% |
D5
medium
residues 1041-1094