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RNA-dependent_RNA_polymerase
Euk-VirAlfalfa_enamovirus_1
RNA-dependent_RNA_polymerase__YP_009249823__Alfalfa_enamovirus_1__1770265
Identity
- Accession:
- YP_009249823 ↗
- Protein ID:
- RNA-dependent_RNA_polymerase
- Kingdom:
- euk
Quality
68.4
mean pLDDT
Cluster
View cluster (38 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 327-421
Domain cluster:
rep: hypothetical_protein__YP_009825042__Birds-foot_trefoil_enamovirus_1__2283314__D329-413
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02122.22 best | Peptidase_S39 | 79.5 | 3.60e-22 | 100.0% | 45.8% |
D2
medium
residues 746-759_1125-1185
Domain cluster:
rep: replicase_polyprotein__YP_009465710__Pepper_enamovirus__2073163__D1125-1175
D3
medium
residues 760-810_892-946_995-1056
Domain cluster:
rep: NIb__YP_006908987__Rose_yellow_mosaic_virus__1048434__D1-17_73-106_202-219_246-320
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02123.22 best | RdRP_4 | 37.2 | 2.40e-09 | 39.9% | 17.2% |
| PF02123.22 | RdRP_4 | 52.7 | 4.80e-14 | 39.9% | 14.4% |