RNA-dependent_RNA_polymerase

Euk-Vir

Beihai_narna-like_virus_2

RNA-dependent_RNA_polymerase__YP_009333277__Beihai_narna-like_virus_2__1922447

Identity

68.5 mean pLDDT

View cluster (39 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-197

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5ts9B00	1.20.59.10	Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase	0.53	32.0	3.50e-01	82.2%	72.0%
3rh3A01	1.20.120.930	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829	0.51	28.0	3.35e-01	97.5%	77.4%
3ucaA00	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.51	40.0	3.58e-01	81.7%	95.6%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4034285	632.22.1.1 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA	0.54	34.0	3.88e-01	82.7%	81.3%
4249009	4006.1.1.1 ↗	alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF	0.52	24.0	3.02e-01	85.3%	69.2%
4664272	4006.1.1.0 ↗	alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain	0.51	24.0	3.06e-01	85.8%	74.8%

D2 medium residues 201-270_338-393_458-522

PDB

Domain cluster: rep: putative_RNA_dependent_RNA_polymerase__YP_002019757__Ourmia_melon_virus__186786__D220-290_323-370_411-481

D3 medium residues 394-418_446-457_523-621

PDB

Domain cluster: rep: RNA-dependent_RNA_polymerase__YP_009337087__Hubei_narna-like_virus_4__1922958__D375-415_481-588

D4 medium residues 622-639_651-715

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4by6A01	1.25.40.790	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.51	43.0	3.04e-01	95.2%	33.2%

D5 medium residues 716-777

PDB