RNA-dependent_RNA_polymerase

Euk-Vir

Beihai_narna-like_virus_1

RNA-dependent_RNA_polymerase__YP_009333283__Beihai_narna-like_virus_1__1922436

Identity

78.9 mean pLDDT

View cluster (39 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-169

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1n81A00	1.10.3030.10	Mainly Alpha › Orthogonal Bundle › Gametocyte protein Pfg27 › Gametocyte protein Pfg27	0.52	45.0	4.37e-01	92.8%	88.7%
1sxjB03	1.20.272.10	Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 ›	0.51	26.0	3.34e-01	70.7%	85.9%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4984703	5065.1.1.3 ↗	alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2	0.53	43.0	3.64e-01	85.0%	82.9%

D2 high residues 596-770

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2dofA00	1.10.10.440	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain	0.52	19.0	2.63e-01	100.0%	61.2%

D3 medium residues 217-273_298-361_403-488

PDB

Domain cluster: rep: putative_RNA_dependent_RNA_polymerase__YP_002019757__Ourmia_melon_virus__186786__D220-290_323-370_411-481

D4 medium residues 362-402_489-574

PDB

Domain cluster: rep: RNA-dependent_RNA_polymerase__YP_009337087__Hubei_narna-like_virus_4__1922958__D375-415_481-588