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RNA-dependent_RNA_polymerase
Euk-VirHubei_narna-like_virus_5
RNA-dependent_RNA_polymerase__YP_009336672__Hubei_narna-like_virus_5__1922959
Identity
- Accession:
- YP_009336672 ↗
- Protein ID:
- RNA-dependent_RNA_polymerase
- Kingdom:
- euk
Quality
71.3
mean pLDDT
Cluster
View cluster (39 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-153
D2
high
residues 582-690
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5lnxF01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.56 | 42.0 | 4.09e-01 | 78.9% | 100.0% |
| 4kf8B00 | 1.25.10.70 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › | 0.55 | 47.0 | 3.61e-01 | 93.6% | 63.2% |
| 1rx0C01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.55 | 41.0 | 4.01e-01 | 78.9% | 95.1% |
| 1wwmA00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.55 | 41.0 | 3.55e-01 | 79.8% | 87.2% |
| 3owaA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.55 | 41.0 | 3.82e-01 | 78.9% | 85.5% |
| 1r2jA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.55 | 37.0 | 3.87e-01 | 70.6% | 100.0% |
| 2v5cA03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.52 | 43.0 | 4.08e-01 | 90.8% | 86.9% |
D3
medium
residues 369-409_465-581