Back to structures

RNA-dependent_RNA_polymerase

Euk-Vir

Beihai_weivirus-like_virus_11

RNA-dependent_RNA_polymerase__YP_009337204__Beihai_weivirus-like_virus_11__1922740

Identity

Accession:
YP_009337204 ↗
Protein ID:
RNA-dependent_RNA_polymerase
Kingdom:
euk

Quality

86.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-148
PDB
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2c42A03 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.64 36.0 3.08e-01 82.4% 34.0%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 31.0 4.04e-01 89.0% 82.1%
3s63A00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.60 36.0 4.40e-01 89.7% 93.2%
2nq2A00 1.10.3470.10 Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC 0.59 46.0 3.53e-01 81.6% 92.2%
1wftA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 27.0 2.99e-01 89.0% 57.7%
5gj7A01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.51 33.0 3.42e-01 92.6% 69.6%
2y27B01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.50 40.0 3.00e-01 83.1% 80.0%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3257722 198.1.1.3 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_1 0.68 38.0 4.80e-01 88.2% 89.4%
3274434 198.1.1.2 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 0.66 39.0 4.90e-01 89.7% 95.3%
3277060 198.1.1.2 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 0.65 37.0 4.81e-01 88.2% 100.0%
3273958 198.1.1.10 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2, SapB_1, Saposin 0.65 38.0 4.77e-01 89.0% 94.1%
3935505 198.1.1.0 alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.65 39.0 4.80e-01 88.2% 95.3%
3269592 198.1.1.2 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 0.64 39.0 4.79e-01 91.2% 96.5%
3248091 198.1.1.2 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 0.64 39.0 4.79e-01 90.4% 96.5%
3257558 198.1.1.10 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2, SapB_1, Saposin 0.62 36.0 4.59e-01 88.2% 97.5%
3932714 198.1.1.0 alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.62 38.0 4.56e-01 89.7% 92.2%
4989705 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.59 34.0 3.82e-01 89.7% 72.4%
4973028 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 32.0 3.90e-01 72.8% 85.0%
3646770 181.1.1.0 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins 0.59 36.0 4.21e-01 89.0% 86.3%
3605793 604.9.1.0 alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 0.59 33.0 4.14e-01 75.0% 97.3%
5001603 198.1.1.0 alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.57 37.0 4.47e-01 87.5% 100.0%
3936293 198.1.1.3 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_1 0.57 33.0 3.88e-01 89.0% 81.1%
4018207 310.2.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.55 40.0 3.77e-01 75.7% 79.4%
4243030 210.2.1.2 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE 0.54 46.0 3.68e-01 89.0% 76.7%
3222274 198.1.1.3 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_1 0.53 33.0 3.81e-01 89.0% 84.0%
4938152 304.163.1.0 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain 0.53 24.0 3.48e-01 89.0% 95.0%
5014971 1075.5.1.8 alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt_3 0.53 38.0 3.33e-01 75.7% 82.8%
3973020 1197.1.1.0 alpha bundles › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY 0.51 39.0 3.55e-01 79.4% 67.2%
4990233 4070.1.1.2 alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 0.51 44.0 3.63e-01 97.8% 85.8%
D2 high residues 157-290
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00293.35 best NUDIX 42.3 1.10e-10 91.8% 91.0%
CATH (70)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4dywA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.83 75.0 7.64e-01 97.8% 97.7%
3qsjA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.83 78.0 6.46e-01 100.0% 96.4%
3o8sA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.83 73.0 7.32e-01 100.0% 91.8%
3dupB01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.83 77.0 6.93e-01 98.5% 81.2%
2fkbC00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.82 77.0 7.05e-01 99.3% 79.0%
3eesA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.82 74.0 7.54e-01 100.0% 96.9%
2dhoA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.82 77.0 6.45e-01 100.0% 75.3%
2fmlA02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.82 77.0 7.15e-01 100.0% 97.6%
2b0vA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.81 78.0 7.48e-01 100.0% 90.5%
4hfqA02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.81 74.0 7.29e-01 100.0% 91.4%
5zrcA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.81 70.0 7.33e-01 100.0% 99.2%
5anvA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.81 73.0 6.98e-01 100.0% 83.0%
1v8wA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.81 75.0 7.11e-01 100.0% 85.1%
3grnA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.80 74.0 7.39e-01 100.0% 94.9%
1hztA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.80 75.0 7.19e-01 100.0% 95.4%
3id9B00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.80 66.0 6.82e-01 100.0% 91.3%
3hhjB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.80 73.0 7.42e-01 100.0% 98.5%
1ryaA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.80 72.0 6.71e-01 94.8% 84.4%
5c7qB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.80 75.0 6.73e-01 100.0% 77.8%
3q91B00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.80 72.0 7.31e-01 100.0% 96.9%
4nfwF00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.80 74.0 7.04e-01 100.0% 85.6%
3cngC02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.80 73.0 7.20e-01 99.3% 91.6%
2o5fB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.79 73.0 6.81e-01 97.8% 83.3%
3gg6A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.79 72.0 6.99e-01 100.0% 89.6%
4k6eA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.79 75.0 7.30e-01 100.0% 94.4%
6uufA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.79 74.0 7.06e-01 100.0% 90.8%
3bm4A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.79 72.0 6.26e-01 97.8% 76.1%
3a6sA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.78 68.0 7.02e-01 97.8% 97.6%
5qoqA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.78 74.0 7.14e-01 100.0% 98.7%
3n77A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.78 71.0 7.05e-01 97.0% 97.9%
3f13B00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.78 69.0 6.72e-01 100.0% 85.5%
2b06A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.78 68.0 6.54e-01 98.5% 82.0%
1vc9A01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.78 67.0 7.04e-01 99.3% 100.0%
3mcfA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.78 71.0 7.21e-01 100.0% 99.2%
2qjoB02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.78 74.0 7.16e-01 100.0% 95.9%
3edsA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.78 64.0 6.48e-01 100.0% 86.5%
1vhzA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.77 72.0 6.51e-01 100.0% 78.1%
3gwyB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.77 70.0 7.02e-01 98.5% 96.2%
1nqzA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.77 71.0 6.48e-01 97.8% 88.3%
2yyhA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.77 71.0 7.06e-01 99.3% 94.9%
2azwA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.77 70.0 6.84e-01 100.0% 89.0%
3fk9A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.77 70.0 6.66e-01 99.3% 84.3%
1sjyA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.77 72.0 6.84e-01 100.0% 89.0%
1mk1A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.77 72.0 6.37e-01 100.0% 72.2%
6u7tA03 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.77 65.0 6.80e-01 100.0% 98.3%
1g0sA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.76 72.0 6.17e-01 100.0% 69.7%
3h95A01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.76 69.0 7.06e-01 100.0% 100.0%
2kdvA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.76 71.0 6.64e-01 100.0% 90.2%
4jzsA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.76 71.0 6.69e-01 100.0% 84.2%
5cfjA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.76 72.0 7.07e-01 100.0% 97.9%
2w4eA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.76 69.0 6.85e-01 100.0% 93.4%
1ktgA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.76 71.0 7.11e-01 100.0% 99.3%
1vk6A02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.76 67.0 6.84e-01 100.0% 96.9%
4ktbA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.76 70.0 6.61e-01 100.0% 94.4%
3j7ye00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.76 70.0 7.03e-01 97.8% 100.0%
3exqA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.75 69.0 6.71e-01 99.3% 89.6%
3sonA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.75 70.0 6.82e-01 100.0% 97.3%
2o1cA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.75 71.0 6.87e-01 100.0% 95.2%
4mpoB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.75 70.0 6.75e-01 100.0% 95.3%
5deqA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.75 68.0 6.74e-01 100.0% 92.8%
2pqvB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.75 67.0 6.44e-01 100.0% 84.2%
3i9xA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.74 70.0 6.59e-01 100.0% 93.6%
1q33A02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.74 69.0 6.31e-01 99.3% 92.4%
3fjyA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.74 70.0 6.55e-01 100.0% 98.7%
4kyxA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.74 69.0 6.86e-01 100.0% 97.1%
1f3yA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.74 68.0 6.36e-01 100.0% 95.2%
1k2eA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.73 69.0 6.60e-01 100.0% 89.5%
6scxA02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.72 67.0 6.72e-01 100.0% 100.0%
1x51A01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.71 66.0 6.45e-01 100.0% 93.0%
4j7hA02 3.90.79.40 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › EvaA sugar 2,3-dehydratase subunit 0.66 61.0 5.68e-01 100.0% 84.8%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4937938 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.84 74.0 7.69e-01 97.8% 99.2%
4956149 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.84 79.0 7.61e-01 100.0% 92.0%
4112358 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.84 73.0 7.15e-01 100.0% 84.8%
4937578 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.83 79.0 7.92e-01 100.0% 98.5%
5035952 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.83 79.0 7.38e-01 100.0% 93.1%
5012044 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.83 74.0 7.19e-01 99.3% 85.5%
3509290 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.83 63.0 7.00e-01 78.4% 95.5%
143236 221.4.1.9 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.83 76.0 7.71e-01 100.0% 98.5%
149351 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.83 75.0 7.64e-01 97.8% 97.7%
4953121 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.83 72.0 7.46e-01 97.0% 97.6%
4459241 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.83 72.0 7.44e-01 97.8% 97.6%
4954158 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.82 76.0 7.73e-01 99.3% 100.0%
3280317 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.82 77.0 7.47e-01 99.3% 90.3%
359529 221.4.1.9 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.82 71.0 7.31e-01 100.0% 94.5%
4025046 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.82 78.0 6.78e-01 100.0% 78.4%
5012147 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.82 77.0 7.07e-01 100.0% 81.8%
5057737 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.82 73.0 7.46e-01 97.8% 96.9%
4937960 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.82 69.0 7.16e-01 91.8% 94.4%
4937802 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.82 74.0 7.51e-01 100.0% 97.7%
3963831 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.82 75.0 7.56e-01 99.3% 96.3%
6256 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.82 77.0 6.60e-01 100.0% 79.2%
4995185 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.82 69.0 7.06e-01 100.0% 90.8%
5058171 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.82 74.0 7.58e-01 98.5% 99.2%
6244 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.81 78.0 7.52e-01 100.0% 91.8%
3410697 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.81 76.0 6.45e-01 98.5% 81.5%
3558321 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.81 74.0 6.84e-01 100.0% 77.6%
5061791 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.81 73.0 7.46e-01 100.0% 97.7%
5025956 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.81 77.0 7.39e-01 100.0% 98.0%
322067 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.81 71.0 6.89e-01 93.3% 89.3%
3580121 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.81 76.0 6.49e-01 100.0% 83.4%
3908864 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.81 76.0 6.61e-01 100.0% 79.9%
5039326 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.81 71.0 7.05e-01 97.0% 88.6%
3839072 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.81 76.0 6.42e-01 100.0% 75.7%
3975388 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.81 73.0 7.30e-01 100.0% 93.5%
5020961 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.81 75.0 7.37e-01 100.0% 93.6%
3278000 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.81 76.0 6.32e-01 100.0% 81.3%
3284361 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.81 76.0 7.27e-01 100.0% 88.7%
3943626 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.81 75.0 6.78e-01 98.5% 76.6%
5059111 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.81 74.0 7.57e-01 98.5% 100.0%
5058232 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.81 72.0 7.36e-01 99.3% 96.9%
3613043 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.80 73.0 5.94e-01 96.3% 69.8%
3978281 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.80 72.0 7.36e-01 100.0% 97.7%
None 0.80 74.0 7.04e-01 100.0% 84.4%
4929536 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.80 76.0 6.76e-01 100.0% 77.2%
4928085 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.80 74.0 6.81e-01 98.5% 80.6%
3947875 221.4.1.9 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.80 72.0 7.36e-01 100.0% 97.7%
3589504 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.80 74.0 6.64e-01 98.5% 77.2%
4954981 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.80 75.0 6.87e-01 100.0% 78.8%
3695569 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.80 73.0 6.15e-01 97.8% 76.7%
4948211 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.80 75.0 7.16e-01 98.5% 88.0%
5027673 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.80 74.0 7.00e-01 98.5% 84.5%
4990017 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.80 75.0 6.84e-01 100.0% 81.2%
1726001 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.80 75.0 6.67e-01 100.0% 76.9%
4943669 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.80 74.0 6.88e-01 99.3% 83.6%
None 0.79 74.0 6.67e-01 98.5% 76.6%
3989003 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.79 74.0 6.93e-01 98.5% 88.7%
3288973 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.79 74.0 6.25e-01 100.0% 76.3%
4980017 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.79 73.0 6.64e-01 98.5% 76.6%
4928536 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.79 73.0 6.63e-01 97.0% 76.5%
5058152 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.79 72.0 7.33e-01 97.0% 100.0%
4934398 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.79 74.0 7.42e-01 99.3% 97.8%
4974972 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.79 75.0 7.18e-01 100.0% 91.3%
5031177 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.79 75.0 7.39e-01 100.0% 97.1%
3276905 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.79 74.0 6.14e-01 99.3% 96.3%
5001210 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.79 74.0 7.15e-01 100.0% 94.0%
3387989 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.79 74.0 6.45e-01 100.0% 79.8%
162532 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.79 72.0 6.17e-01 97.8% 72.8%
4960496 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.79 74.0 7.11e-01 100.0% 94.7%
3286004 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.79 74.0 7.07e-01 98.5% 90.0%
4969371 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.79 71.0 7.25e-01 98.5% 99.2%
4944415 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.79 73.0 6.67e-01 98.5% 78.2%
3928028 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.79 74.0 7.04e-01 100.0% 98.1%
4951818 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.78 74.0 6.83e-01 100.0% 81.1%
3724806 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.78 73.0 6.27e-01 100.0% 93.2%
5001100 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.78 74.0 6.76e-01 100.0% 79.4%
4963253 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.78 73.0 6.57e-01 100.0% 78.1%
4937324 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.78 72.0 7.23e-01 98.5% 100.0%
1247750 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.78 73.0 6.49e-01 100.0% 76.4%
3970070 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.77 73.0 7.24e-01 100.0% 96.4%
4963204 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.77 73.0 6.45e-01 100.0% 95.7%
361004 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.77 69.0 7.10e-01 97.8% 98.4%
6235 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.77 72.0 6.40e-01 100.0% 74.7%
3407467 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.77 71.0 6.51e-01 100.0% 77.6%
5038162 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.77 72.0 6.49e-01 100.0% 78.3%
5003496 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.77 71.0 6.14e-01 100.0% 70.9%
5081998 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.76 71.0 6.72e-01 100.0% 98.7%
3288269 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.76 70.0 6.97e-01 98.5% 96.4%
4117193 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.76 71.0 6.83e-01 100.0% 91.3%
3275069 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.76 71.0 6.63e-01 100.0% 84.4%
169398 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.75 69.0 6.60e-01 99.3% 86.0%
1557154 221.4.1.9 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.75 65.0 6.63e-01 100.0% 94.7%
4031749 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.74 65.0 6.72e-01 97.0% 99.2%
3592350 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.74 69.0 6.73e-01 100.0% 97.9%
3176458 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.74 69.0 6.29e-01 100.0% 88.5%
4944491 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.74 70.0 6.88e-01 100.0% 95.7%
3951244 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.73 67.0 6.40e-01 100.0% 91.0%
3962194 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.73 67.0 6.35e-01 100.0% 89.2%
3539647 221.4.1.9 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.72 66.0 6.40e-01 100.0% 88.7%
3989066 221.4.1.9 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.69 64.0 6.13e-01 99.3% 94.7%
3587077 221.4.1.9 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.69 63.0 6.11e-01 98.5% 97.3%
D3 medium residues 392-424_442-512_595-666
PDB
D4 medium residues 425-441_513-559_667-690
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1w6kA03 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.50 39.0 2.73e-01 83.0% 83.9%
D5 medium residues 579-594_691-774
PDB