RNA-dependent_RNA_polymerase

Euk-Vir

Heterobasidion_partitivirus_13

RNA-dependent_RNA_polymerase__YP_009508053__Heterobasidion_partitivirus_13__1469906

Identity

84.0 mean pLDDT

Orthornavirae› Pisuviricota› Duplopiviricetes› Durnavirales› Partitiviridae› Alphapartitivirus› Heterobasidion_partitivirus_13

TaxID: 1469906

View cluster (450 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 23-42_79-117_199-226_353-367

PDB

Domain cluster: representative

D2 medium residues 43-78_463-565

PDB

Domain cluster: rep: RNA-dependent_RNA_polymerase__YP_656506__Raphanus_sativus_cryptic_virus_1__348449__D32-57_444-535

D3 medium residues 118-133_188-198_227-249_296-352

PDB

Domain cluster: rep: putative_RNA-dependent_RNA_polymerase__YP_009508058__Heterobasidion_partitivirus_3__631431__D106-145_229-253_299-368

D4 medium residues 134-187

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2mpnA00	6.10.140.1340	Special › Helix non-globular › Helix Hairpins ›	0.58	44.0	4.11e-01	83.3%	69.1%
2e62A01	6.10.140.420	Special › Helix non-globular › Helix Hairpins ›	0.52	37.0	3.82e-01	81.5%	84.6%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4008322	101.1.1.17 ↗	alpha arrays › HTH › HTH › Three-helical HTH › HTH_7	0.62	37.0	3.73e-01	70.4%	58.2%
4953182	3877.1.1.0 ↗	alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC	0.60	48.0	3.53e-01	100.0%	88.3%
5041191	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.60	32.0	3.40e-01	85.2%	58.0%

D5 medium residues 250-295_368-462

PDB

Domain cluster: rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181