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RNA-dependent_RNA_polymerase

Euk-Vir

Citrus_yellow_vein-associated_virus_Viruses.

RNA-dependent_RNA_polymerase__YP_009551334__Citrus_yellow_vein-associated_virus_Viruses.__X

Identity

Accession:
YP_009551334 ↗
Protein ID:
RNA-dependent_RNA_polymerase
Kingdom:
euk

Quality

81.4 mean pLDDT

Cluster

View cluster (58 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 10-138_157-182
PDB
D2 medium residues 190-282_330-349_459-471
PDB
Domain cluster: representative
D3 medium residues 283-329_350-382_434-458
PDB
Domain cluster: rep: replicase__YP_002333476__Soybean_yellow_mottle_mosaic_virus__578361__D327-366_395-422_476-495
D4 medium residues 383-433_472-569
PDB
Domain cluster: rep: hypothetical_protein_1__YP_009337274__Changjiang_tombus-like_virus_14__1922807__D158-196_253-344
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00998.29 best RdRP_3 110.0 1.80e-31 66.4% 20.2%
PF00998.29 RdRP_3 50.8 1.70e-13 34.9% 10.1%
D5 medium residues 570-717
PDB
Domain cluster: rep: P95_replicase__YP_009259667__Pelargonium_leaf_curl_virus__35280__D527-559_693-852
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00998.29 best RdRP_3 63.4 2.50e-17 80.4% 24.3%