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RNA-dependent_RNA_polymerase

Euk-Vir

Fusarium_graminearum_mycotymovirus_1

RNA-dependent_RNA_polymerase__YP_009553723__Fusarium_graminearum_mycotymovirus_1__1809243

Identity

Accession:
YP_009553723 ↗
Protein ID:
RNA-dependent_RNA_polymerase
Kingdom:
euk

Quality

90.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-52
PDB
Domain cluster: representative
D2 high residues 56-195
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1gjsA00 1.10.8.40 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Albumin-binding domain 0.61 23.0 3.41e-01 88.6% 76.9%
3b9qA01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.57 30.0 3.72e-01 72.1% 79.8%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3173834 304.48.1.1 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.77 71.0 5.02e-01 100.0% 47.3%
None 0.71 65.0 4.99e-01 100.0% 45.1%
3679386 4967.1.1.0 alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases 0.71 65.0 4.84e-01 100.0% 41.4%
3353681 304.48.1.1 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.71 62.0 5.71e-01 95.7% 76.7%
5029022 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.51 42.0 3.47e-01 88.6% 66.5%