RNA_dependent_RNA_polymerase_P1-P2_fusion

Euk-Vir

Apple-associated_luteovirus

RNA_dependent_RNA_polymerase_P1-P2_fusion__YP_009551922__Apple-associated_luteovirus__2054409

Identity

79.7 mean pLDDT

View cluster (58 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 288-391

PDB

Domain cluster: rep: P1__YP_009552849__Apple_luteovirus_1__2170544__D293-391

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08467.16 best	Luteo_P1-P2	39.3	6.80e-10	100.0%	31.6%

D2 medium residues 4-53

PDB

D3 medium residues 423-515_567-598

PDB

Domain cluster: rep: hypothetical_protein_2__YP_009337688__Beihai_tombus-like_virus_7__1922728__D528-588_642-697_774-796

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	29.5	4.50e-07	58.4%	14.6%

D4 medium residues 616-657_715-787

PDB

Domain cluster: rep: hypothetical_protein_1__YP_009337274__Changjiang_tombus-like_virus_14__1922807__D158-196_253-344

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	107.4	1.10e-30	64.3%	15.2%
PF00998.29	RdRP_3	58.8	5.90e-16	37.4%	8.6%

D5 medium residues 788-939

PDB

Domain cluster: rep: P95_replicase__YP_009259667__Pelargonium_leaf_curl_virus__35280__D527-559_693-852

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	115.1	5.10e-33	89.5%	28.0%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4g6tB00	6.10.20.120	Special › Helix non-globular › Arc Repressor Mutant, subunit A ›	0.50	19.0	2.61e-01	82.2%	63.4%