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RNA_polymerase

Euk-Vir

Lupinus_mosaic_virus

RNA_polymerase__YP_004123939__Lupinus_mosaic_virus__573615

Identity

Accession:
YP_004123939 ↗
Protein ID:
RNA_polymerase
Kingdom:
euk

Quality

93.2 mean pLDDT

Cluster

View cluster (450 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 406-474
PDB
Domain cluster: rep: NIb__YP_007032445__Cassava_brown_streak_virus__137758__D405-481
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 30.4 2.40e-07 78.3% 11.6%
D2 medium residues 1-29_87-104_252-311
PDB
Domain cluster: rep: NIb__YP_009252418__Tobacco_mosqueado_virus__1792583__D13-29_64-80_248-311
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 40.0 3.00e-10 57.0% 13.1%
D3 medium residues 66-86_105-212
PDB
Domain cluster: rep: NIa__YP_003620390__Freesia_mosaic_virus__421012__D109-224
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 78.7 5.50e-22 99.2% 28.0%
D4 medium residues 213-251_312-405
PDB
Domain cluster: rep: KR816341.1__AKQ06880.1__X__00021__D162-195_238-325
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 45.9 4.90e-12 72.2% 21.6%