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RNA_polymerase

Euk-Vir

Eggplant_mottled_crinkle_virus

RNA_polymerase__YP_008999611__Eggplant_mottled_crinkle_virus__270256

Identity

Accession:
YP_008999611 ↗
Protein ID:
RNA_polymerase
Kingdom:
euk

Quality

78.5 mean pLDDT

Cluster

View cluster (58 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 200-287
PDB
D2 medium residues 29-153
PDB
D3 medium residues 441-484_560-592
PDB
Domain cluster: rep: hypothetical_protein_2__YP_009337432__Changjiang_tombus-like_virus_5__1922819__D23-82_137-181
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00998.29 best RdRP_3 60.8 1.50e-16 59.7% 9.3%
PF00998.29 RdRP_3 40.9 1.70e-10 45.5% 6.8%
D4 medium residues 485-539_593-666
PDB
Domain cluster: rep: hypothetical_protein_1__YP_009337274__Changjiang_tombus-like_virus_14__1922807__D158-196_253-344
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00998.29 best RdRP_3 95.3 5.40e-27 58.1% 15.0%
PF00998.29 RdRP_3 77.2 1.70e-21 43.4% 11.3%
D5 medium residues 667-818
PDB
Domain cluster: rep: P95_replicase__YP_009259667__Pelargonium_leaf_curl_virus__35280__D527-559_693-852
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00998.29 best RdRP_3 113.1 2.10e-32 88.2% 29.0%