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RNA_polymerase_subunit_RPO132

Euk-Vir

Nile_crocodilepox_virus

RNA_polymerase_subunit_RPO132__YP_784337__Nile_crocodilepox_virus__1285600

Identity

Accession:
YP_784337 ↗
Protein ID:
RNA_polymerase_subunit_RPO132
Kingdom:
euk

Quality

85.8 mean pLDDT

Cluster

View cluster (58 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 166-343
PDB
Domain cluster: rep: DNA-directed_RNA_polymerase_subunit_beta__YP_009162498__Salmon_gill_poxvirus__1680908__D173-349
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12415.15 best rpo132 60.9 8.00e-17 18.0% 100.0%
D2 high residues 770-872
PDB
Domain cluster: rep: putative_RNA_polymerase_beta_subunit__YP_009052296__Aureococcus_anophagefferens_virus__1474867__D765-873
D3 medium residues 44-123
PDB
Domain cluster: rep: RNA_polymerase_RPO132__YP_008004199__Choristoneura_biennis_entomopoxvirus__10288__D47-126
D4 medium residues 484-581
PDB
Domain cluster: rep: DNA-directed_RNA_polymerase_subunit_beta__YP_003406778__Marseillevirus_marseillevirus__694581__D519-604
D5 medium residues 721-769_877-905
PDB
Domain cluster: rep: 116R__NP_938371__Yaba_monkey_tumor_virus__38804__D710-743_760-781_873-892
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00562.34 best RNA_pol_Rpb2_6 25.8 7.90e-06 60.3% 8.3%
PF00562.34 RNA_pol_Rpb2_6 33.2 4.50e-08 42.3% 8.6%
D6 medium residues 1074-1149
PDB
Domain cluster: rep: IMGVR_UViG_3300025836_000142-3300025836-Ga0209748_10097103__D124-188