RNA_polymerase_subunit

Euk-Vir

Akhmeta_virus

RNA_polymerase_subunit__YP_010085554__Akhmeta_virus__2200830

Identity

84.2 mean pLDDT

View cluster (32 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 460-572

PDB

Domain cluster: rep: RNA_polymerase__YP_010085368__Eastern_grey_kangaroopox_virus__2042482__D459-574

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04983.24 best	RNA_pol_Rpb1_3	33.4	5.90e-08	100.0%	84.0%

D2 high residues 994-1095

PDB

Domain cluster: rep: putative_RNA_polymerase_largest_subunit__YP_009001703__Anomala_cuprea_entomopoxvirus__62099__D1033-1131

D3 medium residues 21-75_160-280

PDB

Domain cluster: rep: putative_RNA_polymerase_largest_subunit__YP_009001703__Anomala_cuprea_entomopoxvirus__62099__D13-74_212-273

D4 medium residues 76-159

PDB

Domain cluster: rep: DNA-directed_RNA_polymerase_II_largest_subunit__YP_010084808__Shrimp_hemocyte_iridescent_virus__2039780__D81-188

D5 medium residues 285-443

PDB

Domain cluster: rep: LC680885.1__BDE75759.1__X__00221__D247-427

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00623.26 best	RNA_pol_Rpb1_2	94.1	1.60e-26	98.1%	95.2%

D6 medium residues 579-690

PDB

Domain cluster: rep: DNA-directed_RNA_polymerase_147_kDa_polypeptide__YP_009329703__BeAn_58058_virus__67082__D598-725

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05000.23 best	RNA_pol_Rpb1_4	42.0	1.10e-10	72.3%	58.9%

D7 medium residues 822-911

PDB

Domain cluster: rep: RNA_polymerase_subunit_RPO147_protein__YP_009143406__Raccoonpox_virus__10256__D846-917

D8 medium residues 963-975_1149-1209

PDB

Domain cluster: rep: RNA_polymerase_subunit__YP_009177121__Turkeypox_virus__336486__D959-979_1149-1201