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RNAse_III
Euk-VirPithovirus_sibericum
RNAse_III__YP_009000977__Pithovirus_sibericum__1450746
Identity
- Accession:
- YP_009000977 ↗
- Protein ID:
- RNAse_III
- Kingdom:
- euk
Quality
81.1
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Pithoviridae›
Alphapithovirus›
Pithovirus_sibericum
TaxID: 1450746
Cluster
View cluster (30 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-169
Domain cluster:
rep: ribonuclease_III__YP_009345357__Noumeavirus__1955558__D4-208
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14622.12 best | Ribonucleas_3_3 | 45.6 | 1.10e-11 | 62.1% | 80.5% |
| PF22935.2 | RM44_endonuclase | 27.4 | 4.50e-06 | 57.4% | 57.6% |
| PF00636.32 | Ribonuclease_3 | 45.9 | 1.20e-11 | 49.7% | 95.1% |
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jfzA00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.89 | 75.0 | 8.00e-01 | 97.6% | 98.6% |
| 7r97A01 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.87 | 74.0 | 7.93e-01 | 95.3% | 99.3% |
| 3n3wA00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.87 | 72.0 | 7.84e-01 | 95.3% | 100.0% |
| 2qvwC06 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.85 | 73.0 | 7.68e-01 | 100.0% | 98.0% |
| 1o0wA01 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.83 | 73.0 | 7.72e-01 | 97.6% | 100.0% |
| 4oogC01 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.81 | 72.0 | 7.36e-01 | 91.1% | 98.1% |
| 3rv0C02 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.81 | 57.0 | 6.18e-01 | 79.9% | 84.0% |
| 2eb1C00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.79 | 75.0 | 7.59e-01 | 99.4% | 100.0% |
| 2qvwA04 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.76 | 63.0 | 6.86e-01 | 89.3% | 100.0% |
| 1vw4501 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.76 | 72.0 | 6.36e-01 | 100.0% | 88.5% |
| 1vw4900 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.76 | 71.0 | 6.72e-01 | 100.0% | 85.1% |
| 2gslF00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.71 | 52.0 | 5.95e-01 | 78.7% | 99.2% |
| 1u61A00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.70 | 52.0 | 5.94e-01 | 77.5% | 100.0% |
| 1u84A00 | 1.10.340.20 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain | 0.69 | 31.0 | 4.31e-01 | 94.7% | 85.2% |
| 3lynB00 | 1.20.150.10 | Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein | 0.57 | 35.0 | 3.97e-01 | 73.4% | 82.3% |
| 3n00A00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.55 | 39.0 | 3.82e-01 | 98.8% | 65.8% |
| 3gi8C00 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.54 | 42.0 | 3.18e-01 | 82.8% | 88.0% |
| 4nftC00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.54 | 43.0 | 4.30e-01 | 85.8% | 92.7% |
| 2jlnA00 | 1.10.4160.10 | Mainly Alpha › Orthogonal Bundle › Hydantoin permease › Hydantoin permease | 0.53 | 43.0 | 3.14e-01 | 84.6% | 75.6% |
| 2wcjA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.52 | 27.0 | 2.98e-01 | 95.9% | 56.0% |
ECOD (98)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4284297 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.88 | 74.0 | 8.01e-01 | 95.3% | 100.0% |
| 4045736 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.88 | 79.0 | 8.20e-01 | 100.0% | 98.1% |
| 3466972 | 171.1.1.0 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like | 0.88 | 72.0 | 7.76e-01 | 95.9% | 97.2% |
| 52378 | 171.1.1.0 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like | 0.88 | 74.0 | 7.99e-01 | 95.9% | 100.0% |
| 4070521 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.88 | 77.0 | 8.05e-01 | 98.2% | 98.1% |
| 5052864 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.88 | 73.0 | 7.94e-01 | 95.9% | 100.0% |
| 4544296 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.88 | 76.0 | 8.07e-01 | 97.0% | 100.0% |
| 4472718 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.87 | 75.0 | 7.32e-01 | 97.6% | 82.8% |
| 4108975 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.87 | 77.0 | 8.11e-01 | 100.0% | 99.4% |
| 3680206 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.87 | 72.0 | 7.57e-01 | 97.6% | 92.9% |
| 4998770 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.87 | 74.0 | 7.91e-01 | 98.2% | 98.7% |
| 3728857 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.87 | 65.0 | 7.28e-01 | 86.4% | 94.8% |
| 4237384 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.87 | 73.0 | 7.89e-01 | 95.3% | 100.0% |
| 2885358 | 171.1.1.0 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like | 0.87 | 76.0 | 7.99e-01 | 99.4% | 98.7% |
| 4447919 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.87 | 77.0 | 7.85e-01 | 99.4% | 93.9% |
| 4437884 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.87 | 76.0 | 7.95e-01 | 97.6% | 98.1% |
| 3398911 | 171.1.1.9 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3, Ribonucleas_3_3 | 0.87 | 76.0 | 5.55e-01 | 100.0% | 38.2% |
| 4460349 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.86 | 81.0 | 8.12e-01 | 99.4% | 96.5% |
| 4530473 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.86 | 77.0 | 8.08e-01 | 98.2% | 100.0% |
| 3823868 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.86 | 74.0 | 7.67e-01 | 100.0% | 94.4% |
| 3964377 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.86 | 75.0 | 7.86e-01 | 98.2% | 98.1% |
| 4505265 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.85 | 71.0 | 7.12e-01 | 97.0% | 85.3% |
| 4433400 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.85 | 77.0 | 7.76e-01 | 100.0% | 92.9% |
| 4952426 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.85 | 73.0 | 7.72e-01 | 95.3% | 98.7% |
| 3838688 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.85 | 75.0 | 7.80e-01 | 100.0% | 96.9% |
| 3928222 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.85 | 76.0 | 7.82e-01 | 99.4% | 97.5% |
| 4209383 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.85 | 74.0 | 7.80e-01 | 97.6% | 98.7% |
| 4172739 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.84 | 73.0 | 7.77e-01 | 94.1% | 100.0% |
| 4485206 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.84 | 76.0 | 7.85e-01 | 100.0% | 98.8% |
| 4551223 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.84 | 77.0 | 7.82e-01 | 100.0% | 97.0% |
| 4506992 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.84 | 77.0 | 7.72e-01 | 100.0% | 94.1% |
| 4999536 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.84 | 73.0 | 7.48e-01 | 100.0% | 93.3% |
| 3184902 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.84 | 61.0 | 6.42e-01 | 74.6% | 89.7% |
| 4095489 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.84 | 79.0 | 7.79e-01 | 100.0% | 93.7% |
| 3277148 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.83 | 69.0 | 7.48e-01 | 97.6% | 100.0% |
| 4206901 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.83 | 77.0 | 7.75e-01 | 100.0% | 95.3% |
| 4674797 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.83 | 70.0 | 7.46e-01 | 90.5% | 97.3% |
| 4175259 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.83 | 77.0 | 7.71e-01 | 99.4% | 95.3% |
| 1736239 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.83 | 74.0 | 7.51e-01 | 99.4% | 94.0% |
| 52376 | 171.1.1.0 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like | 0.83 | 76.0 | 7.66e-01 | 100.0% | 95.8% |
| 3482033 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.82 | 73.0 | 7.03e-01 | 99.4% | 83.2% |
| 4946621 | 171.1.1.16 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › dsrm | 0.82 | 72.0 | 7.53e-01 | 95.9% | 98.1% |
| 3851507 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.82 | 72.0 | 7.18e-01 | 95.3% | 89.0% |
| 3254232 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.81 | 72.0 | 7.34e-01 | 94.7% | 93.3% |
| 3307612 | 171.1.1.0 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like | 0.81 | 76.0 | 6.86e-01 | 97.6% | 78.2% |
| 3584477 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.81 | 72.0 | 6.91e-01 | 96.4% | 82.4% |
| 4022112 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.81 | 68.0 | 7.30e-01 | 94.7% | 100.0% |
| 3497871 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.81 | 64.0 | 6.60e-01 | 80.5% | 100.0% |
| 2010570 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.81 | 71.0 | 7.10e-01 | 91.1% | 92.0% |
| 3497133 | 171.1.1.0 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like | 0.81 | 67.0 | 6.82e-01 | 94.7% | 87.3% |
| 3744100 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.81 | 71.0 | 7.31e-01 | 91.7% | 95.0% |
| 4427540 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.80 | 77.0 | 7.10e-01 | 99.4% | 97.1% |
| 4508353 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.80 | 77.0 | 7.70e-01 | 98.8% | 98.2% |
| 3459299 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.80 | 75.0 | 7.09e-01 | 98.2% | 100.0% |
| 3329782 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.80 | 74.0 | 6.66e-01 | 96.4% | 89.1% |
| 3517158 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.80 | 71.0 | 6.74e-01 | 92.9% | 92.8% |
| 4017889 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.79 | 70.0 | 6.97e-01 | 91.7% | 88.5% |
| 3794340 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.79 | 74.0 | 6.88e-01 | 97.0% | 90.2% |
| 3739402 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.79 | 76.0 | 7.42e-01 | 99.4% | 98.9% |
| 3414818 | 171.1.1.5 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › RM44_endonuclase | 0.79 | 75.0 | 7.28e-01 | 100.0% | 90.3% |
| 3928810 | 171.1.1.9 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3, Ribonucleas_3_3 | 0.79 | 76.0 | 7.06e-01 | 99.4% | 97.5% |
| 3272544 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.79 | 76.0 | 7.23e-01 | 100.0% | 96.8% |
| 3702187 | 171.1.1.0 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like | 0.79 | 74.0 | 7.22e-01 | 97.6% | 97.2% |
| 3683182 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.79 | 76.0 | 7.13e-01 | 100.0% | 88.9% |
| 3420091 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.79 | 73.0 | 6.99e-01 | 96.4% | 94.2% |
| 3802651 | 171.1.1.9 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3, Ribonucleas_3_3 | 0.79 | 73.0 | 6.68e-01 | 96.4% | 93.3% |
| 3830603 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.79 | 76.0 | 7.22e-01 | 100.0% | 92.6% |
| 3782341 | 171.1.1.5 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › RM44_endonuclase | 0.79 | 69.0 | 7.14e-01 | 91.7% | 96.2% |
| 3329265 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.78 | 72.0 | 6.28e-01 | 96.4% | 79.2% |
| 3889597 | 171.1.1.5 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › RM44_endonuclase | 0.78 | 75.0 | 6.99e-01 | 100.0% | 84.5% |
| 3863706 | 171.1.1.5 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › RM44_endonuclase | 0.77 | 74.0 | 6.82e-01 | 100.0% | 80.5% |
| 3678704 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.77 | 71.0 | 6.99e-01 | 95.9% | 90.6% |
| 3098405 | 171.1.1.0 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like | 0.77 | 74.0 | 6.87e-01 | 100.0% | 82.8% |
| 4598973 | 171.1.1.0 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like | 0.77 | 72.0 | 6.51e-01 | 97.0% | 77.7% |
| 3328773 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.77 | 71.0 | 6.83e-01 | 96.4% | 93.2% |
| 3585167 | 171.1.1.5 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › RM44_endonuclase | 0.77 | 74.0 | 6.82e-01 | 100.0% | 82.0% |
| 3626915 | 171.1.1.5 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › RM44_endonuclase | 0.77 | 74.0 | 7.14e-01 | 100.0% | 90.8% |
| 3202652 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 72.0 | 5.62e-01 | 98.2% | 56.1% |
| 3472661 | 171.1.1.5 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › RM44_endonuclase | 0.77 | 65.0 | 6.52e-01 | 87.6% | 92.9% |
| 3409328 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.76 | 67.0 | 6.19e-01 | 90.5% | 82.4% |
| 1108030 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.76 | 70.0 | 7.04e-01 | 98.2% | 96.4% |
| 3934406 | 171.1.1.5 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › RM44_endonuclase | 0.76 | 73.0 | 6.78e-01 | 100.0% | 85.4% |
| 3169606 | 171.1.1.10 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3, RM44_endonuclase | 0.76 | 72.0 | 6.30e-01 | 100.0% | 85.4% |
| 2028807 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.76 | 72.0 | 6.73e-01 | 100.0% | 84.2% |
| 3740678 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.76 | 72.0 | 6.40e-01 | 100.0% | 75.2% |
| 3482432 | 171.1.1.5 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › RM44_endonuclase | 0.76 | 72.0 | 6.65e-01 | 100.0% | 82.4% |
| 3697316 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.76 | 72.0 | 6.66e-01 | 99.4% | 98.0% |
| 3266933 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.75 | 60.0 | 6.24e-01 | 94.1% | 88.1% |
| 3658602 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.75 | 69.0 | 6.49e-01 | 96.4% | 81.5% |
| 3194285 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.75 | 71.0 | 6.07e-01 | 100.0% | 79.8% |
| 3734626 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.75 | 70.0 | 6.35e-01 | 98.8% | 97.7% |
| 4015124 | 171.1.1.0 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like | 0.74 | 71.0 | 5.91e-01 | 100.0% | 88.9% |
| 3815356 | 171.1.1.4 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 | 0.74 | 70.0 | 6.17e-01 | 100.0% | 74.5% |
| 4489673 | 3767.1.1.0 ↗ | a+b two layers › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain | 0.74 | 68.0 | 5.03e-01 | 97.6% | 40.5% |
| 4299664 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.71 | 60.0 | 6.07e-01 | 95.9% | 87.6% |
| 3592552 | 171.1.1.0 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like | 0.71 | 63.0 | 5.81e-01 | 92.9% | 74.8% |
| 3175182 | 171.1.1.0 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like | 0.70 | 61.0 | 6.26e-01 | 99.4% | 96.2% |
| 3171709 | 171.1.1.0 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like | 0.68 | 60.0 | 6.18e-01 | 98.2% | 97.5% |
D2
medium
residues 171-292
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dkkA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.81 | 48.0 | 6.06e-01 | 71.3% | 97.3% |
| 1ah5A03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.67 | 41.0 | 4.76e-01 | 77.9% | 86.0% |
| 3a7rA02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.56 | 34.0 | 3.88e-01 | 70.5% | 80.9% |
| 3ecrB03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.56 | 40.0 | 4.33e-01 | 79.5% | 89.2% |
| 5mj3A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 34.0 | 3.90e-01 | 70.5% | 93.1% |
| 1bxgA01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.51 | 35.0 | 3.45e-01 | 70.5% | 94.1% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3830762 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.82 | 47.0 | 5.35e-01 | 70.5% | 73.7% |
| 3619264 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.82 | 48.0 | 5.58e-01 | 71.3% | 80.0% |
| 3517153 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.79 | 47.0 | 5.65e-01 | 73.0% | 90.0% |
| 4266613 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.77 | 48.0 | 5.66e-01 | 73.0% | 89.4% |
| 3660311 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.76 | 47.0 | 5.64e-01 | 70.5% | 93.8% |
| 3188937 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.75 | 54.0 | 5.91e-01 | 73.0% | 91.0% |
| 4263275 | 330.1.1.3 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dimer | 0.75 | 56.0 | 6.13e-01 | 81.1% | 93.0% |
| 4026008 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.73 | 46.0 | 5.47e-01 | 76.2% | 91.8% |
| 4558929 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.72 | 43.0 | 5.17e-01 | 73.8% | 90.0% |
| 3600840 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.71 | 50.0 | 5.49e-01 | 71.3% | 91.0% |
| 3670595 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.70 | 52.0 | 5.86e-01 | 100.0% | 98.9% |
| 3592743 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.68 | 42.0 | 4.93e-01 | 73.8% | 92.5% |
| 3179468 | 330.1.1.18 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_DHX29 | 0.66 | 48.0 | 4.36e-01 | 74.6% | 56.9% |
| 3228169 | 2484.1.1.233 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1280 | 0.63 | 45.0 | 3.30e-01 | 73.0% | 85.6% |
| 4389562 | 7503.1.1.3 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N | 0.53 | 38.0 | 3.50e-01 | 73.8% | 91.3% |
| 3896422 | 216.1.1.25 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › PF31022 | 0.52 | 37.0 | 3.25e-01 | 72.1% | 70.0% |
| 4991451 | 213.1.1.17 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF1122 | 0.51 | 28.0 | 2.69e-01 | 70.5% | 44.3% |
| 3743072 | 3435.1.1.2 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › CENP-N | 0.50 | 32.0 | 3.09e-01 | 72.1% | 54.5% |
D3
medium
residues 293-350