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RTP_09252017_15_scaffold_29_prodigal-single.1__X__X__00110
Bact-VirRTP_09252017_15_scaffold_29_prodigal-single.1__X__X__00110
Identity
- Kingdom:
- phage
Quality
92.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-181
Domain cluster:
rep: term1_saliva_scaffold_3_curated_closed_complete_prodigal-single.1__X__X__00121__D3-160
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13671.13 best | AAA_33 | 43.8 | 4.70e-11 | 70.7% | 68.5% |
CATH (65)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gp6A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.86 | 67.0 | 6.91e-01 | 86.2% | 84.2% |
| 1ly1A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.83 | 66.0 | 7.25e-01 | 82.3% | 97.4% |
| 4xrpA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.83 | 62.0 | 7.09e-01 | 80.1% | 100.0% |
| 3a4lB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.79 | 66.0 | 6.73e-01 | 86.2% | 98.9% |
| 3u7eB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.78 | 56.0 | 5.65e-01 | 86.2% | 72.3% |
| 1gvnD00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.77 | 64.0 | 5.53e-01 | 86.7% | 62.6% |
| 1bifA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.76 | 63.0 | 6.01e-01 | 86.2% | 85.9% |
| 2bdtA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.76 | 61.0 | 6.30e-01 | 83.4% | 100.0% |
| 1dekA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.74 | 40.0 | 4.92e-01 | 82.9% | 81.4% |
| 2pt5B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.73 | 55.0 | 5.78e-01 | 81.8% | 84.4% |
| 4nu0A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 58.0 | 5.50e-01 | 84.0% | 87.7% |
| 1rkbA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 54.0 | 5.59e-01 | 86.2% | 80.9% |
| 1p5zB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 60.0 | 5.51e-01 | 87.3% | 87.3% |
| 3nwjA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.71 | 54.0 | 5.28e-01 | 84.5% | 72.7% |
| 6hqvA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 55.0 | 5.73e-01 | 83.4% | 87.6% |
| 3lv8A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 57.0 | 5.46e-01 | 84.0% | 86.3% |
| 1knqA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 55.0 | 5.70e-01 | 86.2% | 86.5% |
| 3hr7B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 51.0 | 5.49e-01 | 82.9% | 87.1% |
| 2f6rA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 59.0 | 5.44e-01 | 89.0% | 79.1% |
| 5uivA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 59.0 | 5.46e-01 | 89.0% | 100.0% |
| 4loaA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 51.0 | 5.40e-01 | 84.0% | 85.4% |
| 2bbwA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 57.0 | 5.30e-01 | 85.1% | 84.5% |
| 1gtvA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 56.0 | 5.36e-01 | 84.5% | 90.9% |
| 4cvnA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 49.0 | 4.94e-01 | 85.6% | 72.1% |
| 2vliB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 54.0 | 5.54e-01 | 82.9% | 84.4% |
| 1jjvA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 56.0 | 5.49e-01 | 84.5% | 82.0% |
| 2if2A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 55.0 | 5.37e-01 | 82.3% | 87.6% |
| 1e2jA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 57.0 | 4.73e-01 | 87.3% | 82.4% |
| 1p72A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 57.0 | 4.65e-01 | 87.3% | 83.3% |
| 1e9fA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 56.0 | 5.43e-01 | 86.7% | 100.0% |
| 2plrA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 55.0 | 5.23e-01 | 84.5% | 86.8% |
| 1m8pA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 55.0 | 5.53e-01 | 85.1% | 84.2% |
| 6c6bB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 55.0 | 5.39e-01 | 85.6% | 79.9% |
| 1zakA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 56.0 | 5.22e-01 | 86.2% | 84.1% |
| 1zm7B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 58.0 | 5.67e-01 | 90.6% | 95.5% |
| 3vaaA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 54.0 | 5.53e-01 | 84.5% | 85.8% |
| 4mqbB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 54.0 | 5.23e-01 | 83.4% | 87.2% |
| 2grjA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 55.0 | 5.53e-01 | 84.0% | 87.2% |
| 1qf9A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 56.0 | 5.51e-01 | 87.3% | 86.1% |
| 1uf9A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 55.0 | 5.40e-01 | 85.1% | 87.4% |
| 1ak2A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 55.0 | 5.13e-01 | 86.2% | 88.2% |
| 2yogA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 55.0 | 5.40e-01 | 88.4% | 100.0% |
| 2iyvA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 51.0 | 5.17e-01 | 83.4% | 81.0% |
| 1e6cA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 52.0 | 5.34e-01 | 83.4% | 87.1% |
| 2jaqA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 53.0 | 5.22e-01 | 84.0% | 87.3% |
| 6n39A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 53.0 | 5.11e-01 | 85.1% | 81.9% |
| 3ld9A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 53.0 | 5.31e-01 | 85.6% | 85.6% |
| 4ttrA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 52.0 | 5.06e-01 | 84.5% | 85.1% |
| 2xb4A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 52.0 | 4.88e-01 | 84.5% | 88.3% |
| 3ch4B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 52.0 | 5.21e-01 | 84.5% | 81.4% |
| 2bwjA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 53.0 | 5.22e-01 | 87.3% | 84.7% |
| 7xpcA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 56.0 | 4.57e-01 | 92.8% | 74.4% |
| 3cm0A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 52.0 | 5.23e-01 | 86.2% | 87.5% |
| 3czqC00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 50.0 | 4.31e-01 | 86.7% | 59.9% |
| 1ckeA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 50.0 | 4.72e-01 | 85.6% | 86.8% |
| 4zo4A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 50.0 | 4.87e-01 | 89.0% | 86.6% |
| 7z67A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 50.0 | 4.72e-01 | 90.1% | 96.3% |
| 5hciC00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 48.0 | 4.29e-01 | 86.2% | 99.6% |
| 3tauA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 32.0 | 3.71e-01 | 84.5% | 72.9% |
| 3fdiB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 47.0 | 4.76e-01 | 85.1% | 86.6% |
| 3qivA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 38.0 | 3.72e-01 | 87.3% | 63.3% |
| 3s99A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 32.0 | 3.63e-01 | 85.1% | 74.3% |
| 3b8iC00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.52 | 41.0 | 3.54e-01 | 88.4% | 52.9% |
| 2c61A00 | 3.40.50.12240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 43.0 | 3.25e-01 | 87.8% | 48.0% |
| 2aeaA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.51 | 41.0 | 3.72e-01 | 83.4% | 82.8% |
ECOD (94)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3749861 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.91 | 72.0 | 7.40e-01 | 86.7% | 84.0% |
| 3487094 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.88 | 65.0 | 7.55e-01 | 77.3% | 100.0% |
| 987584 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.86 | 67.0 | 6.93e-01 | 86.2% | 84.2% |
| 3392368 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.84 | 70.0 | 6.97e-01 | 86.7% | 83.2% |
| 9559 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.83 | 66.0 | 7.25e-01 | 82.3% | 97.4% |
| 3269332 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.83 | 68.0 | 7.11e-01 | 84.5% | 96.4% |
| 3472221 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.83 | 69.0 | 7.10e-01 | 87.3% | 88.6% |
| 5019946 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.82 | 66.0 | 7.06e-01 | 85.1% | 94.4% |
| 4030195 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.81 | 60.0 | 5.82e-01 | 86.7% | 69.7% |
| 3985472 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.81 | 68.0 | 7.09e-01 | 91.2% | 95.2% |
| 3578686 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.80 | 72.0 | 6.89e-01 | 92.3% | 83.0% |
| 4995711 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.80 | 64.0 | 6.74e-01 | 85.1% | 91.5% |
| 5032394 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.79 | 66.0 | 6.39e-01 | 86.7% | 78.5% |
| 4945404 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.79 | 65.0 | 6.50e-01 | 85.1% | 85.9% |
| 3211161 | 2004.1.1.62 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 | 0.79 | 64.0 | 6.80e-01 | 92.8% | 93.8% |
| 3384187 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.77 | 64.0 | 6.17e-01 | 85.6% | 77.5% |
| 3195501 | 2004.1.1.140 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Zeta_toxin | 0.77 | 65.0 | 5.01e-01 | 87.3% | 55.9% |
| 320080 | 2004.1.1.140 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Zeta_toxin | 0.74 | 62.0 | 5.56e-01 | 86.7% | 65.3% |
| 1088420 | 2004.1.1.60 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI | 0.74 | 51.0 | 5.46e-01 | 82.3% | 81.2% |
| 3609472 | 2004.1.1.65 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › 6PF2K | 0.74 | 62.0 | 5.27e-01 | 87.3% | 82.5% |
| 3964908 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.74 | 57.0 | 5.95e-01 | 86.2% | 85.3% |
| 4392016 | 2004.1.1.60 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI | 0.74 | 57.0 | 5.61e-01 | 84.5% | 74.9% |
| 3739815 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.73 | 60.0 | 6.02e-01 | 86.2% | 85.0% |
| 4042548 | 2004.1.1.60 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI | 0.73 | 57.0 | 5.78e-01 | 84.5% | 81.1% |
| 4127347 | 2004.1.1.60 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI | 0.73 | 54.0 | 5.77e-01 | 82.3% | 86.3% |
| 3839988 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.73 | 61.0 | 6.45e-01 | 92.8% | 95.2% |
| 4222217 | 2004.1.1.60 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI | 0.73 | 57.0 | 5.79e-01 | 89.0% | 81.7% |
| 3943343 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.73 | 58.0 | 5.94e-01 | 82.3% | 88.6% |
| 4358464 | 2004.1.1.60 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI | 0.73 | 57.0 | 5.68e-01 | 84.5% | 77.9% |
| 4091241 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.72 | 59.0 | 5.93e-01 | 84.5% | 87.2% |
| None | — | 0.72 | 56.0 | 5.70e-01 | 84.5% | 81.1% | |
| None | — | 0.72 | 56.0 | 5.71e-01 | 84.0% | 81.7% | |
| 4281154 | 2004.1.1.191 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 | 0.72 | 60.0 | 5.99e-01 | 91.7% | 84.9% |
| 4539035 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.72 | 59.0 | 5.53e-01 | 85.1% | 89.8% |
| 4648027 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.72 | 57.0 | 5.54e-01 | 82.3% | 75.9% |
| 4649835 | 2004.1.1.60 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI | 0.71 | 56.0 | 5.82e-01 | 83.4% | 87.6% |
| 4065381 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.71 | 58.0 | 5.47e-01 | 84.0% | 89.5% |
| 4987149 | 2004.1.1.60 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI | 0.71 | 58.0 | 5.88e-01 | 89.0% | 85.6% |
| 5036778 | 2004.1.1.192 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_18 | 0.71 | 58.0 | 5.78e-01 | 84.5% | 85.4% |
| 3285822 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.71 | 59.0 | 6.02e-01 | 87.3% | 98.9% |
| 4347964 | 2004.1.1.60 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI | 0.71 | 54.0 | 5.65e-01 | 85.1% | 86.6% |
| None | — | 0.71 | 56.0 | 5.78e-01 | 84.5% | 87.1% | |
| 4203982 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.71 | 57.0 | 5.66e-01 | 84.0% | 81.0% |
| None | — | 0.71 | 56.0 | 5.81e-01 | 84.0% | 87.6% | |
| None | — | 0.71 | 58.0 | 5.84e-01 | 85.1% | 85.6% | |
| 5048600 | 2004.1.1.192 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_18 | 0.71 | 54.0 | 5.30e-01 | 85.6% | 73.3% |
| 4493864 | 2004.1.1.60 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI | 0.70 | 57.0 | 5.72e-01 | 84.5% | 83.2% |
| 4946570 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.70 | 57.0 | 5.60e-01 | 84.5% | 85.8% |
| 3918036 | 2004.1.1.191 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 | 0.70 | 57.0 | 4.77e-01 | 85.1% | 66.1% |
| 4151224 | 2004.1.1.60 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI | 0.70 | 53.0 | 5.56e-01 | 82.9% | 86.1% |
| 3485675 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.70 | 57.0 | 5.65e-01 | 87.3% | 81.6% |
| 3411742 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.70 | 58.0 | 5.38e-01 | 87.3% | 75.4% |
| 5058753 | 2004.1.1.191 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 | 0.69 | 55.0 | 5.59e-01 | 82.9% | 86.7% |
| 4389171 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.69 | 57.0 | 5.80e-01 | 86.7% | 88.6% |
| 3860398 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.69 | 58.0 | 5.24e-01 | 87.8% | 80.8% |
| 3856909 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.69 | 57.0 | 5.57e-01 | 87.3% | 83.0% |
| 4532257 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.69 | 57.0 | 5.50e-01 | 86.2% | 78.0% |
| 4503136 | 2004.1.1.60 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI | 0.69 | 54.0 | 5.54e-01 | 85.1% | 85.1% |
| 3902570 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.68 | 57.0 | 5.21e-01 | 87.3% | 71.7% |
| 4430008 | 2004.1.1.334 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.68 | 57.0 | 4.11e-01 | 86.7% | 40.2% |
| 4113967 | 2004.1.1.60 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI | 0.68 | 56.0 | 5.51e-01 | 91.2% | 81.1% |
| 4371931 | 2004.1.1.191 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 | 0.68 | 55.0 | 5.52e-01 | 85.1% | 82.7% |
| 3752699 | 2004.1.1.191 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 | 0.68 | 56.0 | 4.69e-01 | 86.7% | 73.8% |
| 4040800 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.68 | 56.0 | 5.50e-01 | 86.2% | 84.1% |
| None | — | 0.68 | 55.0 | 5.65e-01 | 85.1% | 87.4% | |
| 3939249 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.68 | 58.0 | 5.59e-01 | 89.5% | 84.5% |
| 4024654 | 2004.1.1.334 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.68 | 58.0 | 5.37e-01 | 91.2% | 86.5% |
| 5044150 | 2004.1.1.188 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin2 | 0.68 | 55.0 | 5.36e-01 | 85.1% | 79.0% |
| None | — | 0.68 | 55.0 | 5.37e-01 | 85.6% | 79.5% | |
| 5024704 | 2004.1.1.188 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin2 | 0.68 | 54.0 | 5.37e-01 | 82.3% | 82.2% |
| 3540855 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.67 | 52.0 | 5.43e-01 | 85.1% | 86.5% |
| 4394509 | 2004.1.1.188 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin2 | 0.67 | 54.0 | 5.33e-01 | 84.5% | 78.8% |
| 3591766 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.67 | 56.0 | 4.88e-01 | 87.8% | 65.3% |
| 4596195 | 2004.1.1.191 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 | 0.67 | 53.0 | 5.34e-01 | 82.9% | 82.2% |
| 3256146 | 2004.1.1.70 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › dNK | 0.67 | 59.0 | 5.28e-01 | 93.4% | 87.3% |
| None | — | 0.67 | 54.0 | 5.45e-01 | 85.1% | 100.0% | |
| 3869795 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.66 | 54.0 | 5.19e-01 | 85.1% | 88.3% |
| 3777469 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.66 | 59.0 | 4.47e-01 | 93.9% | 91.9% |
| 4220958 | 2004.1.1.188 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin2 | 0.66 | 53.0 | 5.32e-01 | 82.9% | 81.5% |
| 3566524 | 2004.1.1.334 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 55.0 | 3.66e-01 | 89.0% | 28.0% |
| None | — | 0.66 | 52.0 | 5.36e-01 | 82.3% | 87.1% | |
| 3866724 | 2004.1.1.51 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sulfotransfer_1 | 0.66 | 53.0 | 4.59e-01 | 85.6% | 60.7% |
| 3597979 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 54.0 | 4.88e-01 | 86.7% | 75.0% |
| 4580430 | 2004.1.1.191 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 | 0.65 | 52.0 | 5.18e-01 | 82.9% | 81.5% |
| 5032600 | 2004.1.1.197 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sulfotransfer_3 | 0.65 | 54.0 | 4.27e-01 | 87.3% | 63.5% |
| None | — | 0.65 | 51.0 | 5.25e-01 | 82.3% | 85.7% | |
| 2512816 | 2004.1.1.202 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_28 | 0.64 | 53.0 | 5.23e-01 | 86.7% | 82.9% |
| 4025000 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.64 | 59.0 | 5.25e-01 | 98.9% | 92.2% |
| 3753842 | 2004.1.1.70 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › dNK | 0.64 | 59.0 | 5.46e-01 | 98.9% | 85.8% |
| 4295855 | 2004.1.1.80 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin | 0.61 | 52.0 | 4.88e-01 | 90.1% | 88.1% |
| 3604577 | 2004.1.1.439 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF26341 | 0.60 | 50.0 | 4.68e-01 | 89.5% | 87.6% |
| 4117812 | 2004.1.1.80 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin | 0.58 | 52.0 | 4.87e-01 | 94.5% | 97.3% |
| 4950786 | 2004.1.1.343 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 | 0.53 | 41.0 | 4.11e-01 | 79.0% | 91.7% |
| 3408925 | 2004.1.1.110 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ORC2 | 0.52 | 37.0 | 3.61e-01 | 73.5% | 77.0% |
D2
high
residues 191-309
Domain cluster:
rep: BML_coassembly_scaffold_50_prodigal-single.1__X__X__00038__D347-509
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08302.17 best | tRNA_lig_CPD | 26.1 | 7.80e-06 | 83.2% | 24.4% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wojA00 | 3.90.1740.10 | Alpha Beta › Alpha-Beta Complex › 2',3'-cyclic nucleotide 3'-phosphodiesterase fold › 2',3'-cyclic nucleotide 3'-phosphodiesterase superfamily | 0.90 | 86.0 | 6.93e-01 | 100.0% | 99.0% |
| 1fr3A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.54 | 29.0 | 3.69e-01 | 93.3% | 91.0% |
| 2wiqA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.54 | 46.0 | 3.79e-01 | 95.8% | 80.0% |
| 2pslA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.53 | 45.0 | 3.78e-01 | 95.8% | 82.5% |
| 2c9jA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.53 | 46.0 | 3.84e-01 | 97.5% | 87.3% |
| 1uisA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.53 | 45.0 | 3.73e-01 | 95.8% | 80.8% |
| 2vqpA01 | 2.70.20.30 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › HRSV-S2 matrix protein, N-terminal domain | 0.53 | 44.0 | 4.48e-01 | 100.0% | 92.5% |
| 4dkmA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.52 | 44.0 | 3.75e-01 | 95.8% | 85.9% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.51 | 28.0 | 3.48e-01 | 93.3% | 92.5% |
| 2g16B00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.50 | 40.0 | 3.68e-01 | 88.2% | 85.9% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3264230 | 264.1.1.0 ↗ | beta barrels › LigT-like › LigT-related › LigT-related | 0.89 | 85.0 | 8.17e-01 | 99.2% | 100.0% |
| 3480974 | 264.1.1.3 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › CNPase | 0.89 | 84.0 | 6.50e-01 | 100.0% | 100.0% |
| 3497100 | 264.1.1.0 ↗ | beta barrels › LigT-like › LigT-related › LigT-related | 0.88 | 84.0 | 6.42e-01 | 100.0% | 98.4% |
| 3835887 | 264.1.1.10 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › tRNA_lig_CPD | 0.87 | 81.0 | 7.40e-01 | 97.5% | 100.0% |
| 3744887 | 264.1.1.10 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › tRNA_lig_CPD | 0.86 | 80.0 | 7.07e-01 | 98.3% | 100.0% |
| 3182852 | 264.1.1.10 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › tRNA_lig_CPD | 0.86 | 82.0 | 6.71e-01 | 100.0% | 98.0% |
| 3611297 | 264.1.1.0 ↗ | beta barrels › LigT-like › LigT-related › LigT-related | 0.86 | 81.0 | 7.55e-01 | 100.0% | 97.9% |
| 3673377 | 264.1.1.0 ↗ | beta barrels › LigT-like › LigT-related › LigT-related | 0.85 | 77.0 | 7.16e-01 | 95.8% | 100.0% |
| 3594510 | 264.1.1.0 ↗ | beta barrels › LigT-like › LigT-related › LigT-related | 0.84 | 80.0 | 6.45e-01 | 100.0% | 99.5% |
| 3176561 | 264.1.1.10 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › tRNA_lig_CPD | 0.84 | 78.0 | 6.39e-01 | 98.3% | 99.0% |
| 3606700 | 264.1.1.0 ↗ | beta barrels › LigT-like › LigT-related › LigT-related | 0.83 | 78.0 | 6.45e-01 | 99.2% | 100.0% |
| 3591493 | 264.1.1.0 ↗ | beta barrels › LigT-like › LigT-related › LigT-related | 0.77 | 72.0 | 6.71e-01 | 100.0% | 97.9% |
| 3387994 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.54 | 34.0 | 3.98e-01 | 98.3% | 92.5% |
| 1157836 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.53 | 42.0 | 3.85e-01 | 84.0% | 85.9% |