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RTP_09252017_15_scaffold_29_prodigal-single.1__X__X__00322
Bact-VirRTP_09252017_15_scaffold_29_prodigal-single.1__X__X__00322
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-175
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14025.12 best | DUF4241 | 36.5 | 7.70e-09 | 98.3% | 99.5% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3edpA02 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.58 | 40.0 | 4.27e-01 | 100.0% | 80.8% |
| 2ikkA00 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.58 | 40.0 | 4.28e-01 | 100.0% | 82.2% |
| 3f8lB00 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.57 | 39.0 | 4.03e-01 | 100.0% | 71.9% |
| 3hfiA00 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.56 | 39.0 | 4.26e-01 | 100.0% | 88.3% |
| 3ddvB01 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.56 | 38.0 | 4.20e-01 | 100.0% | 87.6% |
| 2p19A01 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.55 | 37.0 | 4.21e-01 | 100.0% | 92.3% |
| 3cnvA01 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.54 | 38.0 | 3.96e-01 | 100.0% | 78.7% |
| 4exoA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 24.0 | 2.60e-01 | 100.0% | 47.3% |
| 2ooiA01 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.50 | 36.0 | 3.75e-01 | 100.0% | 80.5% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3827180 | 2484.1.1.110 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE | 0.61 | 30.0 | 3.16e-01 | 100.0% | 49.7% |
| 3285903 | 814.1.1.0 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase | 0.57 | 38.0 | 4.00e-01 | 100.0% | 73.5% |
| 3970103 | 814.1.1.0 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase | 0.57 | 39.0 | 4.07e-01 | 100.0% | 75.0% |
| 3970741 | 814.1.1.0 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase | 0.55 | 37.0 | 3.95e-01 | 100.0% | 78.0% |
| 3942693 | 814.1.1.3 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › UTRA | 0.55 | 38.0 | 3.96e-01 | 100.0% | 76.2% |
| 4045127 | 814.1.1.3 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › UTRA | 0.55 | 38.0 | 3.94e-01 | 100.0% | 75.6% |
| 5952 | 814.1.1.3 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › UTRA | 0.54 | 38.0 | 3.95e-01 | 100.0% | 78.2% |