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RTP_09252017_15_scaffold_29_prodigal-single.1__X__X__00327
Bact-VirRTP_09252017_15_scaffold_29_prodigal-single.1__X__X__00327
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-61
Domain cluster:
rep: BML_coassembly_scaffold_69_prodigal-single.1__X__X__00386__D1-58
D2
high
residues 67-164
Domain cluster:
rep: BML_coassembly_scaffold_172_curated_closed_complete_prodigal-single.1__X__X__00276__D4-90
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7mhuA01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.59 | 42.0 | 2.86e-01 | 74.5% | 32.8% |
| 2e6zA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 33.0 | 4.07e-01 | 71.4% | 93.2% |
| 1gydB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 41.0 | 2.91e-01 | 74.5% | 48.9% |
| 5bncA02 | 3.20.180.10 | Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like | 0.58 | 40.0 | 4.09e-01 | 70.4% | 88.2% |
| 3wxmB02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.57 | 34.0 | 3.15e-01 | 94.9% | 47.5% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.57 | 44.0 | 4.23e-01 | 83.7% | 99.1% |
| 8axiA01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.56 | 41.0 | 2.80e-01 | 76.5% | 46.3% |
| 4zglD00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.54 | 34.0 | 3.39e-01 | 79.6% | 59.8% |
| 4fdtB00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.54 | 48.0 | 3.22e-01 | 99.0% | 66.9% |
| 1qftB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 44.0 | 3.75e-01 | 90.8% | 78.1% |
| 2wp8A00 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.54 | 40.0 | 3.00e-01 | 80.6% | 83.8% |
| 5yjlC02 | 3.20.180.10 | Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like | 0.53 | 38.0 | 3.68e-01 | 73.5% | 76.6% |
| 2pfwA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 36.0 | 3.49e-01 | 71.4% | 100.0% |
| 3jcuO01 | 2.40.160.30 | Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor | 0.52 | 41.0 | 3.44e-01 | 86.7% | 100.0% |
| 1av5A00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.51 | 32.0 | 3.11e-01 | 79.6% | 54.9% |
| 2zgyA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 41.0 | 3.65e-01 | 86.7% | 76.4% |
| 3s6pA03 | 2.60.270.70 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › | 0.51 | 37.0 | 3.36e-01 | 78.6% | 85.2% |
| 3s27B01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 35.0 | 3.21e-01 | 72.4% | 56.4% |
| 4q63A00 | 2.40.10.430 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.50 | 40.0 | 4.12e-01 | 86.7% | 100.0% |
| 2a9sB00 | 3.90.950.20 | Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like | 0.50 | 41.0 | 3.52e-01 | 90.8% | 97.6% |
| 4wfvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 41.0 | 3.61e-01 | 91.8% | 75.8% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3739384 | 4075.1.1.2 ↗ | a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 | 0.61 | 42.0 | 4.27e-01 | 71.4% | 100.0% |
| 5012088 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.60 | 33.0 | 3.24e-01 | 94.9% | 49.1% |
| 3628642 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 40.0 | 2.74e-01 | 70.4% | 51.8% |
| 1695394 | 3270.1.1.1 ↗ | a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase › DUF2470 | 0.58 | 39.0 | 4.15e-01 | 70.4% | 92.1% |
| 4879215 | 3270.1.1.1 ↗ | a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase › DUF2470 | 0.57 | 42.0 | 4.28e-01 | 76.5% | 88.4% |
| 3182774 | 9.4.1.2 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains › DUF3471 | 0.56 | 38.0 | 3.60e-01 | 70.4% | 83.3% |
| 3235763 | 708.1.1.4 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH | 0.55 | 32.0 | 3.48e-01 | 74.5% | 68.8% |
| 3742908 | 4075.1.1.2 ↗ | a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 | 0.54 | 38.0 | 3.92e-01 | 74.5% | 100.0% |
| 4223255 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.53 | 38.0 | 2.64e-01 | 75.5% | 87.5% |
| 164075 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.52 | 36.0 | 3.53e-01 | 72.4% | 100.0% |
| 3217717 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.52 | 36.0 | 2.42e-01 | 73.5% | 65.4% |
| 3530957 | 5.1.4.329 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30693 | 0.51 | 38.0 | 2.60e-01 | 79.6% | 85.7% |
| 3374672 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.51 | 35.0 | 2.39e-01 | 71.4% | 88.7% |
| 3264986 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.51 | 35.0 | 3.43e-01 | 71.4% | 96.4% |
| 3267290 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.51 | 35.0 | 2.47e-01 | 71.4% | 36.1% |
| 3404508 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 36.0 | 2.55e-01 | 75.5% | 61.8% |
| 3784764 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.50 | 38.0 | 2.62e-01 | 80.6% | 93.1% |
| 3954118 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 36.0 | 2.50e-01 | 75.5% | 79.7% |
| 4940718 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 39.0 | 2.67e-01 | 83.7% | 66.8% |
| 3540949 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 39.0 | 2.76e-01 | 81.6% | 86.2% |