RdRp

Euk-Vir

Beihai_partiti-like_virus_2

RdRp__YP_009333350__Beihai_partiti-like_virus_2__1922504

Identity

93.9 mean pLDDT

View cluster (450 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-49_201-221_393-508

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1zp2A02	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.59	36.0	4.50e-01	78.0%	100.0%
3vw5A00	1.50.10.10	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase ›	0.53	38.0	3.03e-01	73.7%	99.2%
3dd7C00	1.20.120.1870	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Fic/DOC protein, Fido domain	0.51	31.0	3.80e-01	77.4%	92.6%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3488467	101.1.10.0 ↗	alpha arrays › HTH › HTH › Cyclin-like	0.64	36.0	4.51e-01	75.3%	88.7%
3654546	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.51	33.0	3.04e-01	89.8%	48.8%

D2 medium residues 50-104_157-200_243-264

PDB

Domain cluster: rep: RdRp__YP_009337885__Hubei_tetragnatha_maxillosa_virus_8__1923250__D61-84_149-215_309-325

D3 medium residues 105-156_265-313

PDB

Domain cluster: rep: RdRp__YP_009329892__Hubei_diptera_virus_18__1922879__D81-159_189-211_249-288

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1p65A00	6.10.140.90	Special › Helix non-globular › Helix Hairpins ›	0.52	23.0	2.94e-01	72.3%	68.4%
2zj2A03	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.51	30.0	3.28e-01	92.1%	70.2%
2vx7A00	3.20.20.80	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases	0.50	44.0	3.05e-01	100.0%	48.8%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
217141	304.48.1.15 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RdRP_3	0.65	59.0	4.00e-01	100.0%	53.2%

D4 medium residues 222-242_314-392

PDB

Domain cluster: rep: KR816341.1__AKQ06880.1__X__00021__D162-195_238-325

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00680.26 best	RdRP_1	33.4	2.90e-08	82.0%	20.4%