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RdRp

Euk-Vir

Norovirus_GII

RdRp__YP_009518849__Norovirus_GII__122929

Identity

Accession:
YP_009518849 ↗
Protein ID:
RdRp
Kingdom:
euk

Quality

93.0 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Pisoniviricetes› Picornavirales› Caliciviridae› Norovirus› Norovirus_GII

TaxID: 122929

Cluster

View cluster (450 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 406-499
PDB
Domain cluster: rep: putative_3D_RNA-dependent_RNA_polymerase__YP_009553719__tremovirus_B1__2058161__D405-481
D2 medium residues 37-74_165-187
PDB
Domain cluster: rep: RdRp__YP_009684411__Norovirus_dog_GVI.1_HKU_Ca026F_2007_HKG__673457__D32-76_164-188
D3 medium residues 75-98_213-249_301-390
PDB
Domain cluster: rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 62.3 5.10e-17 60.9% 20.4%
PF00680.26 RdRP_1 25.1 1.00e-05 29.8% 9.3%
D4 medium residues 99-164_188-212_250-300
PDB
Domain cluster: rep: NIa__YP_003620390__Freesia_mosaic_virus__421012__D109-224